Clupea harengus (Atlantic herring): 105894287
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Entry
105894287 CDS
T09045
Name
(RefSeq) transcription factor HES-5-like isoform X1
KO
K06055
hairy and enhancer of split 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105894287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105894287
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
105894287
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
Di19_C
KH_6
Motif
Other DBs
NCBI-GeneID:
105894287
NCBI-ProteinID:
XP_012676223
Ensembl:
ENSCHAG00000017098
UniProt:
A0A6P3VP35
LinkDB
All DBs
Position
4:20435094..20447679
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AA seq
159 aa
AA seq
DB search
MAPTVTVPMTYSSEHLPLHNKLRKPLVEKLRRDRINSSIEHLKTILDKEFLRQHPDSKQE
KADILEMTVHFLKQKQQQHPSTCSTAANEGYSRCMQEAVNFLSQCEVQTQSQRRLLSHFL
HMLPAVDKSTRVQPQPSSPVRHSSSKEKTPCCTALWRPW
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggcacctactgtcactgtacccatgacctactcttcagagcacctaccactgcataat
aagctgagaaagcctttggttgagaaactgcgcagagatcgcatcaacagcagcattgag
catctcaagactatactggacaaggaattcctgaggcagcatccagactccaagcaggag
aaagctgacatcctggagatgactgtccacttcctgaaacagaagcagcagcagcatccc
tccacctgctccactgcagccaatgagggctactccaggtgcatgcaggaagctgtcaac
ttcctgtcccagtgtgaggtgcagacacagtcccagagaagactgctgagtcacttccta
cacatgctgcctgcagtggacaagagcaccagagtccagcctcagcccagctctccagtc
cgccacagcagcagcaaagagaaaactccatgctgcactgcactctggaggccctggtag
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integrated database retrieval system
