Clupea harengus (Atlantic herring): 105894307
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Entry
105894307 CDS
T09045
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X3
KO
K11471
additional sex combs-like protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105894307 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105894307 (asxl1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
105894307 (asxl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
105894307
NCBI-ProteinID:
XP_012676248
Ensembl:
ENSCHAG00000008933
UniProt:
A0A6P3VNB3
LinkDB
All DBs
Position
4:complement(19534432..19553320)
Genome browser
AA seq
1735 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSPTATEGADAAAATPATTSTATVGT
AEGAEQESCDSTETAAASGENDASVDETSSSASCSTEPQTRLSRSSQSGRQRKKSVMMPR
VVLTPLKVNGEHVPSGPMKRSRGVEVDFETPGSILVNTNIRALINMRTFAAFPPHSQQQL
LQLLPEVDRQVGPDGLPRLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKE
KKVEAWKEKFFEEYHGQRSGLTHEEALKLTMSEPGDVAGAVLDRDTAAVATGTPKRRSVG
RRRREGRIRRRSRADMRRRARRTLCKTSPTAAATSAEQADSPVASDCAPDTPAAPSSPLP
EATAAVQDEVVLPADSEMEAPAEIPSPEAAPSSPVPEPAPTPASTVSSDEPEEPEVPEVS
PRLLPDDVPEPPVASTSSPSSSSSSTSSSSSPSSSPSSASDRQGAFAASSDSSSSSSSSS
SSSSTAAIATDPLDDGASVITTGTAGTGASSRESSPAASPATSSPAVQPKEQKRRPDEPQ
AFTSFPEKRPRLDDRQSFRNTVDSVHTEKPQPTTEEPKVPPIRIQLSRIKPPWVKGAPTY
QICPRIVPPNEGSRRSGTGARTLADIKARAQQARAQREAAAAVAATGDGAGPGGGGSGPG
GGSGLSDRSSGRRAREHPGPVEPGGGSGGGGGDVEEQSSPASSHSSGAQLQLSAVDSERT
TTTAASTPKAHASSPSTSSNPSFPPSEPPQTPTPSPSVGGSPASQAQTEELSPGEDTLSA
SPSDKASDVAPDTPKQILNEPESVGSLPDVSTEEADSNDSRPPTESSPSPSVIEKGPSGA
VSLVPTSIPDSLPRFGAQGVDVIRTRSAVGAQAWEGEQQSGHEQRSASAGVIHHGSDIKQ
EAPAATRNGLSEVGEEQSCRERRPKVHSRIDVGMESKPITGFESSGSCLPSMAGDDDAGA
HSDSTETASDFENEAPEEDSVDWHVTTGDCNGVPVQSGGTKPQNQPVIQSPSRLISRTFS
PPPQHQQPVIQSHVSNPGQGQSVIQQTRFPNGVQNQPVIQTQKQQGPHPARAHASNHIKE
HAPTFGMQSLVQQHLAQAGRDQNRIARLSDNSSNSGKSVIQTEVSDEAEFLRRSSAEDKS
GSAQQPSGGIKKAVASARTMSSVEANNPLVTQLLQGSLSLEKVLPQPHSASKLEINRLPG
SPTVPQAGRQPIPQPRGAAGPRFRNPSDSSAGPTDSPGPEFSPQNQHKVPSARVSPGPGR
GYGPPAPGSLPSRMACLFEEASSRVTALQQYHSQQPGGSVPPGAVPVITSLSSSSSLSSS
SYSTSSSRRPLEITSQSTAAYESAVIKEHPGPQPMRGGTPERPGTFQQHSNSLAPPHPRT
TPDAPSPPHGDLCPSEVIPTVKINWRPTKAPLPHPPQPYQQQQQLSPVATVKNEVSSRPS
CQALTKNPPTPPGGNGTTAAVPSAAAVITKKEPLSSMDSFLSGCGGAMEGLLNMEMSLVR
MAKKEQGRSPYARPGDLPSSASPSSCSPSSTTSSSLPFQLYGKLPKLQQSTGGGVGGVLG
SGGGGGGVMMGGGAPGFSYTANVSVVDGSGFSRSIADSVLNLRSRSGTGNGGIGGGGGQS
AALSIQAFADSAAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagagaaagaaggagcgcacgtgggctgaggccgctcgtatggtc
ctggagaacttctcagacgcccccatgacccccaaacagatcctccacgtcatccaaacg
aagggcctgaaagagatgcgaagtggcacggcccctctagcctgcctggtcaccatgctt
cactctcaggtgcggggtgaccgagtgaagaacagcatcttcttcaagttaccaggcaga
atgagtctcttcaccctaaagaaaaatgcccttcaatggaccaagagccctacggcaaca
gagggtgcggacgctgccgcagctacaccagcaacaacatccacggcgacggttggcaca
gcagagggggctgagcaggagagctgcgactccacggaaacggctgctgccagcggtgag
aatgacgcctcggtggacgagacgtcctccagtgcctcctgttccacagagccccagacg
cgcctcagccgatcctcacagtcgggtcggcagagaaagaagtcagtgatgatgcctcgt
gtcgttctcactccactcaaggtcaacggggaacacgtgccatcaggacccatgaaaaga
agccgtggagtagaagtcgatttcgagaccccaggatccatcctggtgaacaccaacatc
cgagcactcataaacatgcgtaccttcgctgccttccccccacactcccagcagcagctg
ctacagctcctacccgaggtcgaccgacaggttggcccagatggactacctcgtctcagt
agttcagcgctcaataatgagtttttcacacatgcctcacagagttggaaagagcgactg
gccgaaggtgagttcacccatgaaatgcaggtgcgcttcaggcaagagatggagaaagag
aagaaagtggaggcgtggaaagagaagttctttgaggagtaccatggtcaacggtctggc
ctgactcatgaggaggcgctgaaattaacaatgagtgaaccaggggatgttgcaggggct
gttttggacagagacactgctgctgttgccacgggaacaccaaaacggcgcagtgtgggc
cggcggcgccgggagggacgcatcaggcgtcgctcgcgagcagacatgcggcgccgggct
cgacggaccctctgcaagaccagtcccaccgctgcagctacctcggccgaacaagcagac
agccctgtggcctcagactgcgcccccgacactcctgccgccccctcctcgcccctgcca
gaggccactgccgccgtgcaggatgaggtggtcctcccagctgactccgaaatggaggcc
ccggcagaaatcccctccccagaagcagccccctcctccccggtcccggagcccgccccg
accccggcctccaccgtctccagcgacgagccagaggagccagaggttcccgaggtctcc
ccccggctcctgcctgacgacgtgcccgagccccccgtcgcttccacctcctcgccctcc
tcctcttcatcctccacctcctcttcctcttcgccctcctcctcgccctcctctgcctcc
gacaggcagggagcctttgctgctagctcggactcgtcctcctcgtcatcttcctcgtcc
tcctcctcctccacagccgccatcgccaccgacccgctggatgacggggcgtcggtcatc
acgactggcacagccggtaccggcgccagcagcagggagagcagcccggccgccagccca
gccacctccagccccgccgtgcagcccaaagagcagaagaggaggcccgacgagccccag
gccttcactagctttcccgagaagaggccgcgtcttgacgaccgtcagtcctttcgtaac
acagttgacagtgtgcacacggaaaagccgcagcccacaacagaggaacccaaggtccca
ccaatccggatacaactctccaggatcaaaccgccctgggtcaagggggcgccaacgtac
caaatctgtccccgcattgtgccccccaacgaggggtcgcggcgctcagggacgggggcg
cgcacgctcgcggacatcaaagccagggcccagcaggcccgcgcccagcgagaggcagct
gctgctgttgcagccactggcgacggggcagggccgggcgggggcgggagcggcccgggg
ggcggttctggcctatcggatcgcagcagtgggaggcgggcccgagagcacccgggcccg
gtcgagccgggaggaggcagcggaggaggaggcggcgatgtggaggagcagagctcacct
gcgagctctcattcgtctggagcacaactacagctgtccgctgtagactccgagaggacc
acgacgacggccgcttccacgcccaaggcccacgcatcgtctccgtccacctcctccaac
ccgtcttttcctccgtcggaaccgccgcagacccccacgccgtccccatcggtaggggga
agccccgcctcgcaggcccagacggaggagctctcgccaggggaggatacgctctcggcc
agccccagcgacaaagcctctgacgtggctccagacactccaaagcagattctcaatgag
ccagagtcagtgggcagccttccggatgtctccacagaggaggccgactcgaacgacagc
aggccgccaacagagagcagcccttcgccgtctgtaatagagaagggaccgagcggggcg
gtttcgctagtgcccacctccatccctgactcgctgcccaggttcggagcgcagggtgtg
gatgtcatcaggacgcggagtgctgtcggggctcaggcctgggaaggggagcagcaaagt
gggcatgagcagaggtcggcttcggccggcgttatccaccatggctccgacatcaagcag
gaggctcccgctgcaaccagaaatgggctgagtgaggttggcgaggagcagagctgtaga
gaaagaaggccaaaggtccacagccgcattgacgtagggatggagagcaagcccatcaca
ggctttgagagctcgggctcttgtctccccagcatggctggggatgatgacgctggggcg
cacagtgactccacggaaaccgcctccgacttcgagaacgaggccccagaggaggactct
gtcgactggcatgtgacgacaggcgactgcaacggtgtgccagtccagagcggcggcacc
aagccgcagaaccagcccgtcatccagagcccgagtcggctgatctcccggacgttcagc
ccccctccccagcaccagcagccagtcatccagtcgcatgtgtccaaccccggccagggc
cagtccgtcatccagcagacccgcttccccaatggcgttcagaaccagcctgtgatccag
acccagaagcagcagggtccgcaccctgcccgcgctcacgcctcaaatcacatcaaagaa
catgcccccacctttgggatgcagagcctggtccagcaacacctcgcccaggcagggagg
gaccaaaaccgcatcgccaggctgagtgacaacagcagcaatagtgggaagtcagtcatc
caaactgaagtgtccgacgaagccgaattcctccgacggtcgtctgcagaggacaaatct
gggtcggcccagcagccctccggcgggattaagaaggcggtggcttcggcgcggacaatg
tcctcggtggaggccaacaacccgctggtcacccagctactccagggcagcctctccctg
gagaaggtcctgccccagccgcactctgccagcaagctggagatcaacaggttgccaggg
agccccacagtgccccaggccggccggcagcctatcccccaaccccgcggtgcagcgggc
cctcgcttcaggaaccccagcgactcctcggcgggccccacggactctcctggcccagag
ttctccccacagaatcaacacaaggtgccctcggcccgggtctctccaggacccggacgt
gggtacgggcctccggcgccaggctccctgccgtcacggatggcgtgcttatttgaagag
gcctcctcaagagttacggctttgcagcagtatcactcccagcagccagggggcagtgtg
ccgccaggtgccgtgccagtaatcacatccctctcctcatcttcatcattgtcctcgtct
tcttactctacatcctccagccgacgtccgttggaaattacctcgcagagcacggcagct
tatgagtcagccgtgattaaagagcacccgggacctcagcccatgcggggtggaactcca
gaaagacctggaactttccagcagcactctaacagccttgctcccccccatccccgtacg
acacccgacgccccgtcccctccacatggcgacctctgcccctcagaggtcattcccaca
gtcaagatcaactggcgacctaccaaagccccgctccctcacccgcctcagccctatcag
cagcagcagcagctctctccagttgccacggtgaagaacgaagtctcctcccgcccctct
tgccaggcgctcaccaaaaatccccccaccccgcctggaggcaatggcaccactgctgct
gtcccttctgctgctgctgtcattaccaaaaaggagcccctgagctccatggacagtttc
ttaagtggctgtgggggggccatggagggcctgctcaacatggagatgtccctcgtgcgc
atggccaaaaaagagcagggcaggagcccttacgctcgcccaggggacctcccttcctcc
gcctcaccctcctcgtgctcgccttcctccaccacgtcttcctcgctccccttccagctg
tacggcaagttgcccaagctgcagcaaagcacaggcggaggggttgggggtgtgctgggt
agtggtggaggcggcggtggagtcatgatgggcgggggagctcccgggttcagctacacg
gccaacgtgtcggtggtggatgggagcggcttctctcggagcatcgccgacagcgtgctc
aacctgcggtcgcgctccggcaccgggaacggcggcatcggaggcggtggcggccagagc
gcggcgctcagcatccaggcgttcgccgacagcgccgccgaggaggtggccctcaaatgc
tcgtgccggctcaaggccatgatcatgtgccagggctgcggtgccttctgtcacgacgac
tgcatcggcccgtccaaactgtgcgtgtcctgcctggtggtcagatag
DBGET
integrated database retrieval system
