Clupea harengus (Atlantic herring): 105894329 Help Entry 105894329         CDS       T09045                                  Symbol brpf1 Name (RefSeq) peregrin isoform X1   KO K11348   bromodomain and PHD finger-containing protein 1 Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:char03036]     105894329 (brpf1) Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Histone modification proteins    HAT complexes     MOZ/MORF complex      105894329 (brpf1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-HC5HC2H_2 EPL1 zf-HC5HC2H Bromodomain PWWP PHD_2 PHD PHD_NSD PHD-1st_NSD Motif Other DBs NCBI-GeneID:  105894329 NCBI-ProteinID:  XP_012676288 Ensembl:  ENSCHAG00000025294 UniProt:  A0A6P8FFZ7 LinkDB All DBs Position 4:complement(22901259..22975573) Genome browser AA seq 1285 aa AA seqDB search MGLDFDVKTFCHNLRATKPPYECPVESCRKVYKSYSGIEYHLYHYDHENPVPLQSNMPQK RRKGRPPRVSQIGCVDDGVGVDHGVPMGITVRRTPGSPLDQSEHSHSPGRDTMTYAQAQR MVELEIQGRIHRISIFENLDVVSEDENIADDHTSEGGGGMYNGGGCGVSAVGTGDMAGGS SDVTTSGNGAKCVGATPKPGKHKSKDKKKEGGGSHHHSSSTGPTVKLPEVVYRELDQERP DAPPRPSSYYRYIDKSLEELDEEVEYDIDEEDYIWLDIMNDKRHSDGVAPIPQEVFEYLM DRLEKESYFESHNKGDPSSLIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPY IPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDSRWAHVVCALWIPEVCFANTVFLE PIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRET GANGTSFSVRKTAYCDIHTPPGTARPIGGSLGTGSLGSSNSEGGEGEEDDELIVTGEEEG KGGWSSERAKRAKAKSRLKMKRARKILAEKRAAAPVVSVPCIPPHRLSKITSNLTVPRKS QFMQRLHSYWTLKRQSRNGVPLLRRLQTHFQSQRTNEQVLPAIRLDSEDKHAALKEQLKA WQRLRHDLERARLLVELIRKREKLKRETIKIQQLALEMQLTPFLVLLRSTLEQLQERDTS NFFTEPVPLSEVPDYLDHIERPMDFQTMWVLLERHHYPNFQTFEADFLLIVNNCLKYNAK DTVFYRAALRLRETGSFILRQARRQAEHTGYDYESGMHLPREPSPEREQDCERESEREQE WEQERMASVIEEDLLLPENRRRLPLEEQLQILQVRFEEVSSGKHSIGRSRRAKALRKEMT VIKRKLAHQREGGDDAGVPTEDRVSALPHHVSVSTCQDDEESSSQEKDMSTSSSVLAPEV GRRTSVLFSKKNPRVGGPPKRPGRPPKNRDALHIGSSGVSCSVGPPQLPLLNPLRQKKKM RSPRTSSSSESESDNDDPLPGLPSNGFDGGSQPVTESFRVYRNERSLPRSSSDSDSTSSS SSSAASDRTSTTPSKLGRGKPSFSRSAFQEDSSEETSGTENDTYSVGATRAVSHIVRSRS RSGCWMTSDDYTSLDALDLVWAKCRGYPSYPALIIDPKMPREGVFHRGVPIPVPPLDVLK LGEQMTQEAREHLYLVLFFDNKRTWQWLPRSKLVPLGVDQELDKDKMNEGRKSNIRKSVQ VAYHRAMQHRNKVQGDPSSDTSDSD NT seq 3858 nt NT seq  +upstreamnt  +downstreamnt atgggcctggattttgatgtaaagacattctgccacaatttgagggccaccaagcctcca tacgagtgcccagtggagagctgccgcaaggtgtacaagagctacagtggaattgaatac cacctctaccactatgaccatgaaaaccctgtgccactgcagagcaacatgccacagaag cgtcgaaaggggcgtccaccccgtgtatcccagattggatgtgttgatgatggagtggga gtagatcatggagtgcccatgggtattacagttaggcggactccaggtagcccactggac cagtctgaacactcgcactcccctggcagggacactatgacctatgcacaggcccaacgc atggtggagctggagattcaggggcgtatccatcgcatcagcatttttgaaaacctggat gtggtgtctgaagacgagaacattgcagatgaccatacaagtgagggaggaggtggaatg tataatggaggtggatgtggtgtcagtgcagtgggcactggtgacatggctgggggcagc agtgatgtgacgaccagtggcaatggtgcaaaatgtgttggtgctacacccaagcctggc aagcataaaagcaaggacaaaaaaaaggagggtggaggctcacatcatcatagttcttca actgggcccacagttaaactacctgaggtggtctaccgagagttggatcaggagaggcct gatgccccaccacgcccatcctcctactacaggtacatagataagtctctggaggagctg gatgaagaggtggagtacgacatcgatgaggaggactacatctggctggatataatgaat gacaagcgtcatagtgacggggtggcacctatccctcaggaagtctttgagtatttgatg gacaggctggaaaaggagtcatattttgaaagtcataacaagggagaccccagttcactg atcgacgaggatgctgtctgctgtatctgcaacgacggagaatgccagaacagtaatgtc attctgttctgtgacatgtgcaacctggcggtacatcaggagtgctacggtgtgccgtac attcctgaaggccagtggctgtgtcgtcgctgtctgcagtcaccctcccgggctgtggat tgtgccctctgccccaacaagggaggtgccttcaagcagacagatgattcccgatgggcc catgtcgtctgtgcactatggatcccagaggtatgctttgccaacacagtctttctggag cctatagacagcattgagcacatcccacctgcacgctggaagcttacctgctacatttgc aaacagcgcggttctggagcgtgtattcagtgccacaaagccaactgttacaccgccttt cacgtgacgtgtgcccagcaggcaggtctctacatgaagatggagccagttcgggagacg ggggccaatggtacctctttcagtgtccgaaagacagcatattgtgatattcacactcca cctggcacagccaggccaataggaggaagtttgggtactgggagccttggatcttccaac agtgaaggaggagagggggaggaggatgatgaactcattgtaactggagaggaggaagga aaaggagggtggagctctgagcgggccaagagggcaaaggccaagtcaagactgaagatg aagagagcaaggaaaattctggcagagaagcgagcagctgcaccagtggtgtcagtacca tgcatccctccacacaggttgagtaaaattacaagtaatttgacagtgcccaggaagagt cagttcatgcagcgcctgcacagttactggaccctgaagaggcagagtcgtaatggagtg ccactcttgcgtaggcttcagacacactttcagtctcagcgcaccaatgaacaagtgctc cctgcaataagactagatagtgaagacaagcatgcagctctgaaggaacagttgaaggct tggcagagattaagacatgacctggagagagccagactacttgtagaactgattcgcaag agagagaagctaaagagagaaacgatcaaaatacagcagctggcactggagatgcagctg actcccttcttagttttgttgcgcagcaccctggaacaactgcaggaacgtgacacaagc aacttcttcactgaacccgtaccccttagtgaggtgcctgactacctggaccacattgag cgtccaatggatttccagaccatgtgggttttgttggagagacatcactatccaaacttc caaacctttgaggctgacttcctgcttattgtcaataattgtcttaagtacaatgccaaa gacactgtcttttatcgtgccgctctccgactccgtgagaccggcagctttatactccgt caagcccgacggcaggcagaacatactgggtatgactatgaatctggtatgcacttacca cgggaaccaagcccagagagagagcaagactgtgagcgagagagtgagcgggaacaggag tgggagcaggagaggatggcttcagtcatcgaggaagacctacttctgccagagaatcgc aggcgcttgccactagaggagcagttgcaaatattgcaagtacgctttgaggaagtcagc tctggaaagcacagtattggtcgatcccggcgtgccaaagccctgcggaaagagatgact gtcattaagcgcaaactggctcatcagcgagaaggaggcgacgacgctggagtgcctacg gaggacagagtgtctgctctaccccatcatgtctctgtaagcacctgtcaagatgatgag gaaagcagcagccaagagaaagacatgagtacctcctcgtctgtgttggctccagaagtg ggccgccggacctctgtccttttctccaagaagaaccccagggttggtgggccacccaaa cggcctggacggccaccaaagaaccgtgatgcactgcacatagggtcttcaggtgtgagc tgttcagttgggccaccacaactacccttgctaaaccctctacgtcagaagaagaaaatg cgcagtcctcgcacaagctccagctctgagagtgagagcgataacgatgaccctcttcct ggtttgcctagcaatggctttgatggtggcagccagcctgtgactgagagtttccgtgta taccgcaatgaacgcagtctcccacgttccagttcagactctgattccaccagcagtagc agcagcagcgcggcctctgacaggaccagtactactccctctaaactgggccgtggaaag ccttcattttcccgttctgcctttcaagaggacagcagtgaagagacatcaggaaccgag aatgacacttactcagtgggagcaactcgggctgtatctcatattgtccgaagccgcagt aggtctggttgttggatgacttcagatgactacacatctttagatgcattggacctagta tgggccaagtgtagaggttacccatcgtacccagcactgatcatagacccgaagatgcca cgagagggtgtgtttcataggggtgtgcccatccctgtgcctccactggatgttctcaag ctgggtgagcagatgactcaggaggctcgtgaacacctttatttggtcctgttcttcgac aacaagaggacctggcagtggcttccgcggtccaaactggtgccactgggagtggatcag gaactggataaagacaagatgaacgagggcaggaagtcaaacattagaaagtctgtgcag gtggcgtatcaccgagccatgcagcaccggaacaaagttcagggagaccccagcagtgac accagtgacagtgactga

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