Clupea harengus (Atlantic herring): 105894330
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Entry
105894330 CDS
T09045
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105894330 (pym1)
03015 mRNA surveillance pathway
105894330 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105894330 (pym1)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105894330 (pym1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
CDGP
Motif
Other DBs
NCBI-GeneID:
105894330
NCBI-ProteinID:
XP_012676290
Ensembl:
ENSCHAG00000022501
UniProt:
A0A6P3VN29
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All DBs
Position
4:complement(21608072..21613130)
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AA seq
194 aa
AA seq
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MATPYVTDDSGKYIAATQRPDGTWRKPRKVKDGYTPQEEVPVYENKYVKFFKSKPDLPPG
MSPDDAALSKQQQQQQQQGDTDSEAGGMSKAAKRNMKRREKRKQQQQLEPGEEEVDEVTE
ATEKLQIATETSSAEMVATEKAKKIKNLKKKLRQIEELQQKVDSGEIKNVSQEQKDKLSR
AEALRKELQQLGDS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccctatgtgacagatgattcgggcaaatacattgctgccactcagaggccg
gatggcacctggcgaaagccacgaaaagtgaaggacggttacactcctcaggaagaagtc
ccagtgtatgagaacaagtatgtgaagttctttaagagtaagccagatcttcctcctggc
atgagtcctgatgatgcagcgctgagcaagcagcagcagcaacagcaacagcagggggac
acagattcagaggcgggggggatgtccaaggcagctaaacgcaacatgaagcgcagggaa
aagcgcaagcagcaacagcagctggagcccggagaagaggaggtggacgaagtcaccgag
gctacagagaaactccagattgccacagagaccagcagtgccgaaatggtagccacagag
aaggccaagaagatcaagaacctgaagaagaagctgcgacagatagaggagcttcagcaa
aaagtcgattcaggtgagatcaagaacgtcagccaggagcagaaggacaagctgagccgg
gcagaagctctgcgcaaggagctccaacagctaggggactcctaa
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