Clupea harengus (Atlantic herring): 105894334
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Entry
105894334 CDS
T09045
Symbol
emc1
Name
(RefSeq) ER membrane protein complex subunit 1 isoform X2
KO
K23562
ER membrane protein complex subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105894334 (emc1)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
105894334 (emc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Motif
Other DBs
NCBI-GeneID:
105894334
NCBI-ProteinID:
XP_012676294
Ensembl:
ENSCHAG00000011231
UniProt:
A0A6P3VN09
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Position
4:complement(20543853..20552457)
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AA seq
964 aa
AA seq
DB search
MSWLRYSFAVFLYLLQCTDAVFEDQVGKFDWRQQYVGNVRFAFFDTHSQASKKLLVATEK
NIFASLNSRTGELFWRHVDKTGPEGNIDALLVHGQDAVVVVGDGRVLRCWETNIGGLNWE
VLLDTGSFQSAAFIGVQDFVKYVAVLKKSAISLHYLSNGHQKWVENLPDSDTVQYQTVYS
GGQGEVLVLGLVPNSHIVIVSYNIEDGEIMEQMSVEAPWMSSLEESCVVVGRGILLCIDP
ITLSLYTLPLNLEEKAEMNQILLQSLDLEVSSGFQPLLTATQPNPARPPLTAFFLQLGPE
HHILLDLSDGIITALRDFKPSRLATFATTGEKTVVGVMAPKNETACSINLFTVDTGRRLL
DTTVIYHLDPSGGKPNKLHIQAFLKKDDSVGYRAMVQTEDFALTFLQQPGRVVWSREEAL
ADVITMEMVDLPLTGTQAELEGEFGKKADGLFAMVLKRLSSQLILLQTTIGHLWKLFYDA
RKPRSQVKNEVTFETLSRDEFNLQKMMVMVTASGKLFGIDSKSGSILWKHYLENIQPDSA
FNLMVQRTTAHFPHPPQCTLLVKDKETGLASLHVFNPIFGKKSHISVPALPRPILQTLLL
PLMDQDYGKILLLIDDQYKVTAFPSNKNVLQQLQESASSIYFYLVDSSQGRLSGFRLRKD
LSSELIWEVVIPVEVQKIVEVKGKRPNEHVHSQGRVMGDRSVLYKYLNPNLLAVVTESTD
THQERSFVGIVLIDGVTGRIIHDAVQKKAKGPVHFVHSENWVVYEYWNVKSRRIEFSVLE
LFEGMELYNSTVFSSLDRPHPPQVLQQSYIFPSPISTLEATLTEKGITSRHLLVGLPSGA
ILSLPKMFLDPRRPEMVSDQSREENLIPYAPELPIRAEWFINYNQTVARVRGIYTAPSGL
ESTCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYVLISSVLLGLFFATMISKRLAEVKLLN
RAWR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggctaagatatagttttgcagtctttctgtatttattacaatgtacagatgct
gtatttgaagaccaagtgggaaagtttgattggagacagcagtacgtgggcaatgtgcgt
ttcgccttctttgatacccattcacaagcgtccaagaagcttttggtcgcaacagagaag
aatatatttgcatcgttgaattccaggactggagaattattttggaggcatgtggataaa
acaggaccagagggaaacatcgacgctcttcttgttcatgggcaagatgctgttgtggtg
gtgggagatggacgtgtacttcgctgctgggagaccaatattggtgggctgaactgggaa
gttctgctggacactggaagttttcagtcagcagcatttattggtgtgcaagactttgtc
aaatatgtagctgtactcaagaaatcagctatttctctccactacctctccaatggtcac
cagaaatgggtggaaaaccttcctgacagtgacacagttcagtatcaaacagtatactca
ggaggtcagggagaagtcttggttctgggcctagttcctaactcccacatagtcattgtg
tcatataacattgaagatggagaaattatggaacagatgtctgtggaagccccatggatg
tccagcttggaggagagttgtgtggtagtaggaagaggtatcctgttatgtatcgacccc
atcaccctctccctctacaccctgcctctgaatttggaagagaaggctgagatgaaccag
atcctcttacagtctctggacctggaagtgtcctcaggtttccagcctctgctgaccgcc
acccagcccaaccccgcacggccccccctcactgccttcttcctgcagctgggccccgag
caccacatcctgctcgatctcagtgatggcatcatcactgccctcagggacttcaaacct
tcacggctggcgacgtttgccactaccggtgagaagacagtagttggagtcatggcgccc
aaaaacgaaactgcttgcagtatcaacctcttcactgtggacacgggccggagactgtta
gacaccactgtcatctaccacttggacccaagtggcgggaagccaaataaactgcacatc
caggccttcttgaaaaaggatgactctgtgggctacagagccatggtgcagacagaggac
tttgctctcaccttcctacagcagcctgggcgggtggtctggtcaagggaggaggcactg
gctgatgtgattaccatggagatggttgatttgccactgacaggaacccaagctgagctg
gagggagagtttggaaagaaagctgatggtctgtttgccatggtgctgaagcgcttgtcc
tcccagctcatcctgctgcagacaacgattggtcacctgtggaagctcttctacgacgcc
cgcaagccccgcagccaagtcaagaacgaggtcacctttgagacgttgtcccgggatgag
ttcaacctgcagaagatgatggtgatggtgaccgcttcaggaaagctctttggcatcgac
agcaaatctggaagtatcctgtggaagcactacctggagaacatccagccggactcagcc
tttaatctgatggtgcagaggaccactgcacacttccctcacccacctcagtgcactctg
ctagtcaaggataaggagaccggcctggcatctctccatgtgttcaatcccatttttggg
aagaagagtcacattagcgtgccggctttgccacgaccaatacttcagactctgctattg
ccattgatggatcaggactatggtaaaatcctactgctcattgatgaccaatacaaggtc
acagccttcccgtccaataagaatgtgctgcagcagcttcaggagtctgcctcctccata
tatttctacctggtggactcgagccagggaagactttctggcttccgcctccgcaaggat
ctgtcctctgagttgatctgggaggtggtcatccccgtagaagtgcagaagatagtggag
gtgaaaggcaagcggcccaatgagcatgtgcattcccagggtcgcgtcatgggagaccgc
agtgtgctctacaagtatttgaaccccaacctcctggcggttgtgacggagagcacagac
acccaccaggagcgcagctttgtggggatcgtcctgattgacggcgtgacgggccgcatc
atccatgatgccgtgcagaagaaggccaaaggccccgtccactttgtgcactctgagaac
tgggtggtgtatgagtactggaacgtaaagtctcgcaggattgagttctctgtcttggag
ctgtttgagggaatggaactgtacaacagtaccgtgttcagctccctggaccggcctcac
cctcctcaggtgctgcagcagtcctatatcttcccctcccccatcagtactctagaggcc
acgctcacagagaagggcatcaccagccgacacctgctggtggggcttccatcaggggct
attctgtccttaccaaagatgttcctggacccaaggagaccagaaatggtttctgaccaa
agcagggaggagaatctgattccttatgcaccagaattgcccattcgagctgagtggttt
atcaactacaaccaaactgtagcaagagtaagaggaatatacactgccccttctggtctg
gagtctacatgtctggtggtggcatatggcctggatatctaccagactcgtgtatacccc
tctaaacagtttgatgtactcaaggatgactatgactatgtactgattagcagcgtgctg
ctcggactcttcttcgccaccatgatcagcaagagacttgcagaggtgaaattgctgaat
cgtgcatggcggtaa
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