Clupea harengus (Atlantic herring): 105894348
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Entry
105894348 CDS
T09045
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105894348 (rprd1b)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105894348 (rprd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
105894348
NCBI-ProteinID:
XP_012676317
Ensembl:
ENSCHAG00000024227
UniProt:
A0A6P3VNF0
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All DBs
Position
4:complement(21989161..22015058)
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AA seq
330 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSSLIVRVWHREMKKAKSSRKLTFL
YLANDVIQNSKKKGPEFTRDFEGVLVDACSHVAREADTGCKRPMERLLAIWQERSLYRAD
FIQQLKLAIEDSNSPKIKSTEDKKAPKRAFQKIQEEEEEEEDDYRAQYSPRDADGSGPQL
TEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACLL
LAEYNGRLAAELEDRRQLARMLTEYIHSQKEALTEREQKLEEYKQKLARVTQVRKELKSH
IQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattctccgagtctgcgttagagaagaagttatcggagctcagtaactctcaa
cagagtgtgcagaccttgtcactatggataattcaccatcgcaagcattcatctcttatc
gtccgagtatggcacagagaaatgaagaaagctaaaagctccagaaagctgacgtttctt
tacctcgctaatgacgtgatccagaacagtaagaagaaaggtcccgagttcactcgagat
tttgagggtgttcttgtagatgcctgctctcatgttgcaagggaggcggacacaggctgt
aaaaggcccatggagaggcttctagctatctggcaggaacgcagcttgtaccgcgctgac
ttcatccagcagttaaagctggccattgaggactccaacagccccaaaataaagtcgaca
gaggacaaaaaggcacctaaaagagccttccaaaagatccaggaggaggaggaggaggag
gaagatgactacagagcacaatattctccaagggatgcagatggcagtggaccgcaactg
acagaggagcttgtgaaagctctccaagatttggagaacgctgcttctggagatgctgct
gtgaggcagaagatcgcttctctaccgcaggaggtccaggatgtgtcgctactggagaag
atcacagataaggaggctgcagacaagttatccaagacggtagatgaggcgtgtcttctg
ctggcagagtacaatgggcggctagcagcagagctggaggaccgacggcagctggcgcgc
atgctcacggagtacatccacagccagaaggaggccctcactgagcgtgagcagaaacta
gaggagtacaagcagaaactggcacgggtaactcaagttcggaaggagttgaagtcgcac
atccagagcttgcctgatctgtctctactgccgaacgtcactggaggcctggctcctctg
ccttcagcgggggacctcttctctacagactga
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