Clupea harengus (Atlantic herring): 105894372
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Entry
105894372 CDS
T09045
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105894372 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105894372 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105894372 (spaw)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Transforming growth factors (RSTK binding)
105894372 (spaw)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
105894372
NCBI-ProteinID:
XP_012676339
Ensembl:
ENSCHAG00000007069
UniProt:
A0A6P3VP86
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Position
7:complement(28100049..28102784)
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AA seq
413 aa
AA seq
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MDALGFTVRVAMVYYCMGQISNSGFIAASGSSDHWYLNGSRLAFSGIAHHQGIFPLYMMQ
LYRSYRSADRESLGTTDEALPLRQADSVVALMAKGCYQVGDHWSITFDLTSLRRSDEVHL
AELRLRVPEFWGSKRALLDVFHAHDGNQRLLLGRIRAAPLHRPNSWQVFNVSTLLRHWLQ
QGQALYSPEGAELGSGWTEEGSGDDIKDMVNLPSRRPGLHHRPGVNHATAGRVMMVVFSE
QRIRSPAPSLLRTAQNSKHVTPQAVPPATPKGGPPGRRHKRNRLVPEHRPPPPEASPETE
TQATPETTARPLCRRVDMWVDFDQIGWDQWIVHPKRYNAHRCEGECPSPLDESFKPTNHA
YMQSLLRMYHPERVACASCVPTRLSPLSMLYYEDDGVVLRHHEDMVVEECGCQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttgggttttactgtccgtgtagctatggtgtactactgtatgggtcagata
agcaactctggttttattgcagccagtggttcatccgaccactggtatcttaacggctcg
aggttggctttcagtggaatcgcacatcaccagggcatctttccactctatatgatgcag
ctttaccggtcataccgatcggctgaccgcgagtctttaggcaccaccgacgaggccttg
cctctgcgtcaggcggactcagttgtggcactaatggcaaaagggtgttatcaggttggt
gatcactggagcattacttttgacctcacatccttgcggcggagtgacgaggtgcatctg
gcagagctgcgactccgagtgccagagttctggggctccaaacgcgctctgctggacgtg
ttccacgcacacgatggtaaccaacggctactgctgggccggatccgtgccgcgcccctg
cacaggcccaactcatggcaggtcttcaacgtcagcacgctgctcagacactggctgcag
cagggccaggctctatacagcccggaaggagcggagctcgggagtggttggaccgaggag
ggtagtggtgatgacattaaggacatggttaacctgccgtcccgtcgcccaggactccac
cacaggccgggggtcaatcacgcgacggccgggcgtgtgatgatggtggtcttctccgag
cagcggatcagaagcccggcgcccagtttactgcggaccgcacagaactccaaacacgtc
acccctcaggcggtcccacccgcgacgcccaagggaggcccgccggggcggaggcacaag
aggaaccggctggtcccggagcaccgcccccccccgcccgaggcctcgcccgagaccgag
acccaggccacgcccgagaccacggctaggccactgtgccgacgggtggacatgtgggta
gactttgaccagattggctgggaccagtggattgtccaccctaagcgctataacgcacac
cgctgtgagggcgagtgtccctctcctctggatgagagcttcaagcccaccaaccatgca
tacatgcagagtttgctgcggatgtaccaccccgagcgggtggcgtgtgcctcctgtgtg
cccacgcgcttgagcccgctgtccatgctgtactacgaggacgatggtgtggtgcttcga
catcacgaggacatggtggtggaggagtgtggctgccagtga
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