Clupea harengus (Atlantic herring): 105894500
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Entry
105894500 CDS
T09045
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105894500 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105894500 (unga)
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
105894500 (unga)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105894500 (unga)
Prokaryotic type
105894500 (unga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
105894500
NCBI-ProteinID:
XP_031426990
Ensembl:
ENSCHAG00000000967
UniProt:
A0A6P8FU74
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Position
7:30196199..30202445
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AA seq
300 aa
AA seq
DB search
MTALRSLFFQRSLLYSVKVVVIQRSSLTKYTKLIQAKKLKTENTDTIGSSSELSPEQLDR
IAHNKQEALDRLIAHTAPDGLGESWRRALSKEFTKTYFKQLMSFVADERKKHTVYPPPQQ
VFTWTQMCDIKDVKVVVLGQDPYHGPGQAHGLCFSVQKPVKPPPSLGNMYKELGSDIEGF
QHPQHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDRGWETFTDAVIQWLSTNLDGLVFML
WGAYAQKKGAAINKKRHHVLQAVHPSPLSAHRGFFGCKHFSRTNELLKKSGKTPIDWTAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttaagatccctattctttcaacggtcgctgttatattcggtcaaagtagtt
gtaatacaacgcagtagtttaactaaatatacaaaacttatacaggcgaagaaactgaag
actgagaatacggacacgattggctcctcgtctgagctgagcccagagcagttggaccgg
atcgctcacaacaagcaagaggcactggaccgactgatagcccacacggcccccgatggc
cttggggagagctggcgaagagccctgagcaaagaatttaccaagacctacttcaaacag
ctgatgtcctttgtagcagacgagagaaagaagcacacagtctaccctcctccacagcag
gtcttcacatggacccagatgtgtgacattaaagatgtgaaggttgtggtattgggacag
gacccataccatgggccaggtcaggctcatggactgtgcttcagtgtgcagaagcctgtc
aaacccccacccagcctggggaacatgtataaggagctgggctctgacatcgagggcttc
cagcatccccaacacggtgacttgacaggctgggccaaacaaggagtgcttctgctcaac
gctgtactaacagtgagggcacaccaggccaactctcacaaagatcggggttgggagacg
ttcactgatgcagtcatccagtggctcagtaccaacctggacggactagtgttcatgctg
tggggtgcctatgcccagaagaagggggcggccattaataagaagcgccaccacgtcctg
caggcagtccacccctctccactgtcggcccacagaggcttcttcggctgcaagcacttc
tccagaaccaacgagctgttgaagaagtctgggaagacgcccatcgactggactgccctt
taa
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