KEGG   Clupea harengus (Atlantic herring): 105894559
Entry
105894559         CDS       T09045                                 
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
  KO
K22661  calsyntenin 3
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105894559 (clstn3)
Cell adhesion molecules [BR:char04515]
 Cadherins
  Cadherin related
   105894559 (clstn3)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 105894559
NCBI-ProteinID: XP_031432193
Ensembl: ENSCHAG00000007103
UniProt: A0A6P8FW85
LinkDB
Position
11:23228819..23243865
AA seq 955 aa
MDRMNFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFKIHNGPSGSGSAQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANTKKSHKATVHVRVNDVNEFSPVFVERHYEASVPEGRLFDRIVKVEALDADCS
PQYSQICFYEIATRDVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAYDCGKRRTQADAQV
TVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPILHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLVFSFNGSSHIAM
VPDSVVSGVSGNHFTLQLWMRRGGANTQPPTSQAKNFRKEEETIICSTVKNDDSYSHYSL
SVHGCRLSLLYWADVSADRPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAR
IHDNGAIPNPVPHQRMVIGASWEPEDKQKEILNNTIPEGRDTVKYVGGYRGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRPLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
SPEKEELLVDMEAIKERGLDIINTTAYIAITGAESISVYEDVLRSIHYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHTGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGVGGGDKEGSSQWDDSALT
IIVNPMESYESQMGISADTEGEGEEDEEVADSPDDGSDDQRIIIKKDGRDATRRY
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggacagaatgaattttctctcctttctcctcctttgcttgacttcggttgccaatggc
aacaaagcaaataagcacaagccatggatcgagacagagtatcagggcattgtcatggag
aatgacaacacagtcttgctcaaccctccgttgttcgccctggataaggatgcccctctt
cactatgcaggtgagatctgtgggttcaagatccacaacggtcccagcgggtccggctca
gcccagtttgaggctgtggttctggaccgctccacaggagagggtctggttcggtccaaa
gagcctctggactgtgagagccagcgggaacacagcttcactatccaagcctacgactgt
ggagagggtccagatggggccaacaccaagaagtctcacaaggccacagttcatgtgcgt
gttaatgacgtgaacgagttctcccctgtgtttgtggagcgccactatgaggcctctgtg
ccagagggtcgcctctttgaccgcatcgtcaaggtggaggccctagatgcagactgctcg
ccacagtacagccagatctgcttctacgagatcgccacacgcgacgtgccattcgccatt
gacaacgacgggaacatcaagaacacggagcctctggactcaaagcgccagcgcgttcac
acgttctgggtcacggcttatgactgcgggaagagacgtacccaggcagatgcccaggtt
accgtaacggtcaaaccgtcctgcaagcctggctggatcggatggactaagagggttgaa
tacacacctgggtctggtagtattccactctttcccattctacacctggagacatgcgaa
gagactgtttggaatatccaggccaccgtagagctgcagactggacatattggcaagggc
tgtgacagagacagctattccgaccggtctgtgcgtaggctttgtggtgccgtaagggga
gaagttgacctgctcccgcctccttccccggcagccaattggacagctgccttgcccacg
ctcccttcctctgattcctccctcgtcttttccttcaatggctcgtcccacatcgccatg
gtacctgactctgtcgtctcgggggtgtctggaaatcatttcaccctccagctgtggatg
cgcagggggggagcaaacacacagccgccgacgagccaggccaaaaacttccggaaggag
gaggagaccatcatctgcagcacagtcaagaatgatgactcctactcccactactcactg
tctgtgcacggctgccgcctctccctcctctactgggccgacgtctctgctgaccggcct
gtcaagttcctctggaaactggagcaggtttgtgacagtgagtggcatcacctgtccctc
agtgtgcagttcccctccgtcacactctacgtggatggggtgacctttgaccctgctcgt
atccatgacaacggtgccatccccaaccctgtcccacaccagcgaatggtcatcggtgct
tcctgggagcctgaggataagcagaaggagatcctgaacaacaccattcctgaggggaga
gacacagtcaaatacgtcggtggctaccgaggcctcttgtctggggtaaccgtgcgtcca
ggaagtgtggagcctcacagtgttgtggagtgtctgtatgcctgcagagaggggctggac
tttggggatctggagacgctaggctctggcatgaaggtgcatgtgaaccccagtcagtca
gtgctggtactggagggcgatgacattgagagcttcaaccgcgccgttcagcaggtgacc
tacaggaactctcttcgcttcgccacacctggggtcaggcccctcaaactcaccacctcc
cttaggtgtttcaacgaggagagctgtcttactctcaggccattggagggctacctggtc
gtcctccagcccgacgccccccagatctccctgtctggagtggggcctcacctggccagg
cccgctcccgagtttgaagggccccgcggagttcctctattccctgagctgcgcatcgtc
tgctccctctcccacgcagtgaacacggccgcccagggcatggagggtggagcccttatg
tccgatgctgtggcccataccttggatggatgtgaagtccaacccttaggggaggagtta
agcccagagaaggaggagcttttggttgatatggaagcaatcaaggagaggggactggac
atcattaacacaacagcctacattgctatcacaggtgctgagtcgatctcagtgtacgag
gatgttctgcgctccattcattatcgcctggccaagggctctgctcgcttcgagaggcgc
ttccgcctgtcctgctcagagatgaacggacgctacaccagcaatgagctcactctggag
gtgaatttcctgcactctctggacagtctgtaccatccctcccacttactggcctctcag
cagcagttcctgcacccctcccaccacacaggagagctgagtggccacacactacccaac
ccacaccgcaactcagtggttccaggtgcagccacggtcatcataatggtgtgcgtagga
ttcctggttgtcatggttattctgggagtgttccgaatccgttccatccatcgccgtgga
gagggtgtcgggggcggagataaagagggcagcagccagtgggatgactctgctctcacc
atcattgtcaatcccatggagtcctacgagtctcaaatgggaatatctgctgacacagag
ggggagggagaggaggacgaggaagtggcagactcgcctgatgatggcagtgatgaccag
agaattatcatcaaaaaagatggcagagatgccactcggcgttactga

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