Clupea harengus (Atlantic herring): 105894559
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Entry
105894559 CDS
T09045
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105894559 (clstn3)
Cell adhesion molecules [BR:
char04515
]
Cadherins
Cadherin related
105894559 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
105894559
NCBI-ProteinID:
XP_031432193
Ensembl:
ENSCHAG00000007103
UniProt:
A0A6P8FW85
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Position
11:23228819..23243865
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AA seq
955 aa
AA seq
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MDRMNFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFKIHNGPSGSGSAQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANTKKSHKATVHVRVNDVNEFSPVFVERHYEASVPEGRLFDRIVKVEALDADCS
PQYSQICFYEIATRDVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAYDCGKRRTQADAQV
TVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPILHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLVFSFNGSSHIAM
VPDSVVSGVSGNHFTLQLWMRRGGANTQPPTSQAKNFRKEEETIICSTVKNDDSYSHYSL
SVHGCRLSLLYWADVSADRPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAR
IHDNGAIPNPVPHQRMVIGASWEPEDKQKEILNNTIPEGRDTVKYVGGYRGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRPLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
SPEKEELLVDMEAIKERGLDIINTTAYIAITGAESISVYEDVLRSIHYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHTGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGVGGGDKEGSSQWDDSALT
IIVNPMESYESQMGISADTEGEGEEDEEVADSPDDGSDDQRIIIKKDGRDATRRY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctcctttctcctcctttgcttgacttcggttgccaatggc
aacaaagcaaataagcacaagccatggatcgagacagagtatcagggcattgtcatggag
aatgacaacacagtcttgctcaaccctccgttgttcgccctggataaggatgcccctctt
cactatgcaggtgagatctgtgggttcaagatccacaacggtcccagcgggtccggctca
gcccagtttgaggctgtggttctggaccgctccacaggagagggtctggttcggtccaaa
gagcctctggactgtgagagccagcgggaacacagcttcactatccaagcctacgactgt
ggagagggtccagatggggccaacaccaagaagtctcacaaggccacagttcatgtgcgt
gttaatgacgtgaacgagttctcccctgtgtttgtggagcgccactatgaggcctctgtg
ccagagggtcgcctctttgaccgcatcgtcaaggtggaggccctagatgcagactgctcg
ccacagtacagccagatctgcttctacgagatcgccacacgcgacgtgccattcgccatt
gacaacgacgggaacatcaagaacacggagcctctggactcaaagcgccagcgcgttcac
acgttctgggtcacggcttatgactgcgggaagagacgtacccaggcagatgcccaggtt
accgtaacggtcaaaccgtcctgcaagcctggctggatcggatggactaagagggttgaa
tacacacctgggtctggtagtattccactctttcccattctacacctggagacatgcgaa
gagactgtttggaatatccaggccaccgtagagctgcagactggacatattggcaagggc
tgtgacagagacagctattccgaccggtctgtgcgtaggctttgtggtgccgtaagggga
gaagttgacctgctcccgcctccttccccggcagccaattggacagctgccttgcccacg
ctcccttcctctgattcctccctcgtcttttccttcaatggctcgtcccacatcgccatg
gtacctgactctgtcgtctcgggggtgtctggaaatcatttcaccctccagctgtggatg
cgcagggggggagcaaacacacagccgccgacgagccaggccaaaaacttccggaaggag
gaggagaccatcatctgcagcacagtcaagaatgatgactcctactcccactactcactg
tctgtgcacggctgccgcctctccctcctctactgggccgacgtctctgctgaccggcct
gtcaagttcctctggaaactggagcaggtttgtgacagtgagtggcatcacctgtccctc
agtgtgcagttcccctccgtcacactctacgtggatggggtgacctttgaccctgctcgt
atccatgacaacggtgccatccccaaccctgtcccacaccagcgaatggtcatcggtgct
tcctgggagcctgaggataagcagaaggagatcctgaacaacaccattcctgaggggaga
gacacagtcaaatacgtcggtggctaccgaggcctcttgtctggggtaaccgtgcgtcca
ggaagtgtggagcctcacagtgttgtggagtgtctgtatgcctgcagagaggggctggac
tttggggatctggagacgctaggctctggcatgaaggtgcatgtgaaccccagtcagtca
gtgctggtactggagggcgatgacattgagagcttcaaccgcgccgttcagcaggtgacc
tacaggaactctcttcgcttcgccacacctggggtcaggcccctcaaactcaccacctcc
cttaggtgtttcaacgaggagagctgtcttactctcaggccattggagggctacctggtc
gtcctccagcccgacgccccccagatctccctgtctggagtggggcctcacctggccagg
cccgctcccgagtttgaagggccccgcggagttcctctattccctgagctgcgcatcgtc
tgctccctctcccacgcagtgaacacggccgcccagggcatggagggtggagcccttatg
tccgatgctgtggcccataccttggatggatgtgaagtccaacccttaggggaggagtta
agcccagagaaggaggagcttttggttgatatggaagcaatcaaggagaggggactggac
atcattaacacaacagcctacattgctatcacaggtgctgagtcgatctcagtgtacgag
gatgttctgcgctccattcattatcgcctggccaagggctctgctcgcttcgagaggcgc
ttccgcctgtcctgctcagagatgaacggacgctacaccagcaatgagctcactctggag
gtgaatttcctgcactctctggacagtctgtaccatccctcccacttactggcctctcag
cagcagttcctgcacccctcccaccacacaggagagctgagtggccacacactacccaac
ccacaccgcaactcagtggttccaggtgcagccacggtcatcataatggtgtgcgtagga
ttcctggttgtcatggttattctgggagtgttccgaatccgttccatccatcgccgtgga
gagggtgtcgggggcggagataaagagggcagcagccagtgggatgactctgctctcacc
atcattgtcaatcccatggagtcctacgagtctcaaatgggaatatctgctgacacagag
ggggagggagaggaggacgaggaagtggcagactcgcctgatgatggcagtgatgaccag
agaattatcatcaaaaaagatggcagagatgccactcggcgttactga
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