Clupea harengus (Atlantic herring): 105894601
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Entry
105894601 CDS
T09045
Symbol
wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase homolog
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105894601 (wrn)
03400 DNA repair and recombination proteins [BR:
char03400
]
105894601 (wrn)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105894601 (wrn)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105894601 (wrn)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105894601 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
105894601
NCBI-ProteinID:
XP_031433995
Ensembl:
ENSCHAG00000011541
UniProt:
A0A6P8GGE0
LinkDB
All DBs
Position
12:26286243..26326211
Genome browser
AA seq
1473 aa
AA seq
DB search
MTDRTLPEWMSNVQNPGKKTTEQTGPFKKNVLEPDLPFLEFTGTVIYSQEKNDCSFLSED
LRSGLPPGSAIGFDLEWPPSFSKGKTKKVAMVQMCASEQKCYLFHLSSMTGFPPGLKMLL
EDETIKKVGVGIEGDMWKLLSDFDVKLRNFVELSDLANEKLRCMERWSLDGLVKHLFRKQ
LLKDKDVRCSQWDDFELTEDQRRYAATDAYAGLIIHQKLESIVHGGWKVHRDLKNKLSQL
AKNISDLTDCIPEEVPCTSRTDELIDEMSQRLESLKEEILVNNTSAEDVQAKPEPNPTAI
LPPDSPNTHRTTSPTLGRSPPEERHGGTDRVSMRDPIHIGDHSKANDSKSASKDDIMSLD
ISEYELQMMEMQARREELEEQSTLDFKRTALNRSSDLSCEVESDEEFENEMLQCVEEVEK
LDNGSTVVCHGQKQSQADSVTIEEEEDIEEEEEEEGFDPEFPQPTPEQIKCLKMYFGHHS
FKPVQWKVIHSVLSERRDNLVVMATGYGKSLCFQFPPVLCGNISVVISPLISLMEDQVLQ
LEMSNIPACFLGSAQTKNVTADLKKGLFRVVYMTPEFCSVNIPLLEHLNNTVGLSLIAID
EAHCISQWGHDFRNAYRDLGKLKNTLHHVPIVALTATASPSIREDIVKSLHLKDPLITCT
SFDRPNLYLDVNRKSSNIYQDFKHLLNKKKSGGYEFEGPVIVYCPAKKETERVAEALSKL
EIRCGVYHAGLQIKQRRETHHRFVRDEIQCVVATVAFGMGINKPDIRKVIHYGAPKEMES
YYQEIGRAGRDGLPAACHVLWAPQDMALNRFLLNQTNSDKMRTYKMQMMGKMEKYLNSTR
CRRKLILSHFEDKQLRKVTSGILGTSKCCDNCKFGSTRSLLSPSKAHSDSGMQDFGEGAF
QLLGAIDSLGERFGVTVPILFLRGSTAQKVPEKYRHLPLFGTGRSVPETWWKALGRALVL
EGYLAECTGQSKFTTLCKLSPKGRSWFGSSKVASQRTLLLQPNQDLYVRASASRQNIETT
NIRSQVTLASESPQRGGTITKTVSSLSVRKVDMSSRMASPPVALPAPQPPSVSPRELELQ
TKLYAKLVSGRQELASLRDIPPAILATNKILLDIAKTRPCTLTSLKQVDGVSEAKSIMLE
PLLQTIVQFCKTHGLQMSLSSTATSSCPAQTCPSVGSTTPMSMLLSALVTYRLFQLEGKT
LRQVCDARSLPLSVVETHLLQALMANHQLDVERAGLTAIIRSTITRIITSPPLNSDLSDV
KAIRARVPEHISTFLLRLTVTLLQREGVQQGTASGSQASRSEPAWIEKQDKPIQASKPPP
PLRAASPLAPRPAPLLAPRPEPQPPQASTVQPALDELDGSEDDLFSEMPMPEDEVGVSDT
SAARGKSCAGNAPVVASLVAPLAAPHTSAMELASWNQEELDTDTQELFADSPPQQNVSQT
AKRKLPEWAVPPRASISGAASAKKNKRKKGLFM
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagaacattaccagaatggatgtcaaacgtgcaaaacccgggaaaaaagaca
acagaacagactggtcccttcaagaaaaatgtccttgaacctgatttacctttcctggag
tttacaggaaccgtcatatacagtcaggagaaaaatgactgttcatttctgtcagaggat
ttaaggtcaggccttcctcctggctctgctataggcttcgatctggaatggcccccgtcc
ttctccaaggggaagaccaagaaggtggccatggtccagatgtgtgcctcggagcagaag
tgttatttgtttcacttgtcttccatgacaggatttccccctggcttgaaaatgcttttg
gaggatgagacgatcaaaaaggtcggtgtgggaatagaaggagacatgtggaagttgctg
tctgattttgatgtcaaactgcgcaactttgtggagctctctgatctggctaatgagaag
ctgaggtgtatggagaggtggagtctggatggactggtcaagcaccttttcaggaagcag
ctgttgaaagacaaggatgtccgctgtagccagtgggacgactttgagctgacggaggac
cagaggagatacgctgccacagatgcttatgccggtctgatcattcatcaaaagctcgag
agcattgttcacggtgggtggaaggttcacagggatcttaaaaacaagctctctcagctg
gccaagaatatcagtgatctcactgattgcattcctgaagaagtgccttgcacaagcagg
actgacgaactgatagatgaaatgtcccagagacttgagtccttaaaagaggagatactg
gtgaacaacacatcagctgaagatgtccaggccaagcctgagccaaatcccaccgcaatc
ctgcctcctgattcccccaacacgcacagaaccacttcccccaccttgggacggtcccca
cctgaagaacgtcacggtgggactgacagagtcagtatgagagacccaatacatattggg
gaccatagcaaggcgaacgactcaaaaagtgcctctaaagatgacatcatgtccttggat
atctcagagtatgaactgcagatgatggagatgcaggccagacgagaggagttggaagag
cagtctactctggatttcaagagaacagcactgaacaggtcctctgacttgtcctgcgag
gtcgagagtgatgaagagtttgaaaatgaaatgcttcagtgtgtggaggaagtagagaag
ctagataatggaagcactgtggtttgccatggtcagaaacaatcacaggcagactccgta
accatagaggaagaggaagatattgaagaggaagaagaggaggagggatttgatccagag
tttccacagcccacccctgagcaaattaaatgtctgaagatgtattttggacatcacagt
ttcaaaccggttcaatggaaagtgatccattctgttctcagcgagagaagagataatctc
gttgtcatggcaactggttatgggaagagtctgtgcttccagttccccccggtgctgtgt
gggaacatcagtgtggtcatctcccccctcatctctctcatggaggaccaggtgctacag
ctcgaaatgtccaacattccagcttgttttcttggatcagcccagaccaaaaacgttact
gctgacttgaaaaagggcctcttccgagtggtgtacatgactccggagttctgttcagtc
aacattccactcctagaacacctcaacaacacagttggcctttcgctgatagccatcgat
gaagcccattgcatttctcagtggggacatgacttcagaaatgcttacagggacctgggg
aagctcaagaacactctgcaccatgttcccatagtggctctcactgccacagccagccct
tctatacgtgaggacatcgtcaagagtctccacctgaaggaccccttgatcacctgtacc
tctttcgaccggcccaacctttacctggacgtgaaccgcaagtccagcaacatctaccag
gacttcaagcacttactcaataagaagaaaagtggtggctatgagtttgaaggccctgtc
atcgtgtactgccccgccaagaaggagaccgagcgggtggcggaagccctctcgaagctg
gagatccgctgtggcgtctaccacgccgggctccagatcaaacagaggagggaaacgcat
caccgcttcgtgagggatgagatccagtgtgttgtcgccaccgtggcttttggcatgggc
attaacaagcccgacatccgcaaagtcatccactacggggcgcctaaagagatggagtcc
tactaccaagagatcgggagggcaggaagggacggcctgccggccgcttgtcacgtgctg
tgggcgcctcaggacatggccttgaacagatttctgctaaaccagaccaacagtgataaa
atgaggacttataaaatgcagatgatgggcaagatggagaagtatctgaactctaccaga
tgtagaagaaagctgattctgtcccactttgaggacaagcagctgcggaaggttacctca
gggatcttggggaccagcaagtgctgtgacaactgcaagtttggctctaccaggtccctt
ctcagccccagcaaagcccactcagactcaggcatgcaggactttggtgaaggcgccttc
cagttactgggtgccatagattcccttggagagcgtttcggcgtgaccgtacccatcctc
tttctccgaggctctaccgcacagaaagttccggaaaagtaccggcatctacctctgttt
ggcacgggacggagtgtgcctgaaacctggtggaaagcgctgggtcgtgcgctagtcctg
gagggctacctggcagagtgcaccggccaaagcaagttcaccactctctgcaaactcagc
cccaagggcaggtcatggttcggcagctcgaaggtcgccagccagaggaccctcctcctt
cagcccaaccaggacctgtatgtcagggcctccgcctccagacaaaatattgagacgaca
aacattagaagccaggtcacccttgcatcagaatctcctcagagaggtggcacaatcacc
aagaccgtatccagtctgtctgttagaaaggtggacatgtcctccaggatggcgtctcca
cccgtggccctgccagcaccccagcctccatcggtctctcccagagagctggagcttcag
accaagctttacgctaaactggtttccgggcggcaggagctggctagtctgagggatatc
ccgcctgccatacttgctaccaacaagatcctcttagacatagctaagaccaggccttgt
accttgaccagcctgaagcaggtggatggggtgagtgaagccaagtccatcatgctggag
cccctgctgcagaccatcgtgcagttctgcaagactcacggtctccagatgagcctgtcg
tccacggcaacatcctcctgtcctgcccagacttgcccgtctgtgggcagcactacgccc
atgtcgatgctcctcagtgcgctcgtcacctacagactctttcagctggagggcaagaca
ctgaggcaggtgtgtgatgcgcgcagcctgcctctgtccgtggtggagacccacctcctg
caggccctgatggccaaccatcagctggacgtggagagagccggcctgacggccatcatc
cgcagcaccatcacccgcatcataacctcccctccgctcaactcagacctcagcgacgtg
aaggccatccgagcccgagtgccagagcacatcagcaccttcctgctgcgcctcaccgtc
accctgctgcagagggagggagtccaacagggcacagccagtggcagccaggcctcgagg
agtgagcctgcgtggatagagaagcaggacaaacccatccaagcctccaagcccccacct
cctctgagagcagcgtcccccctggcccccagacctgcgcccctcctggcccccagacct
gagccccagcctccccaggcgtccactgtccagccagccctggacgagctggacggcagt
gaagatgacctcttcagcgagatgcccatgccagaggatgaggttggggtgagcgacacc
agcgctgctcgtggcaagtcctgtgccggaaatgcccctgtagttgcctctctagttgcc
cctctagctgcccctcacacctccgccatggagttagcctcctggaaccaggaagagctg
gacaccgacacccaggagctgttcgccgactccccaccgcagcagaatgtgagccagaca
gccaagaggaagcttcctgagtgggctgttcctccacgggcctccatctctggggccgct
tcggcaaagaaaaacaaacggaaaaaaggactgttcatgtaa
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integrated database retrieval system
