Clupea harengus (Atlantic herring): 105894609
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Entry
105894609 CDS
T09045
Symbol
tln1
Name
(RefSeq) talin-1 isoform X1
KO
K06271
talin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105894609 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105894609 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105894609 (tln1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105894609 (tln1)
Exosomal proteins of other cancer cells
105894609 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
I_LWEQ
Talin_R4
Talin_middle
VBS
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
DUF7783
Vinculin
PH_SLA1
Motif
Other DBs
NCBI-GeneID:
105894609
NCBI-ProteinID:
XP_031433990
Ensembl:
ENSCHAG00000016169
UniProt:
A0A6P8GGD3
LinkDB
All DBs
Position
12:26946709..27047536
Genome browser
AA seq
2563 aa
AA seq
DB search
MVALSLKISVGNVVKTMQFEPSTMVYDACRMIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVHDVVEEKKEETMGTLKRDKTAMRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGIEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACDFAG
FQCQIQFGDHNETKHKPGFLDLKEFLPKEYIKNKGEKKIFQAHKNCQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECTMRVDEKTKEVMQEWSLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNKMGKVETGSVALPAIMRSGAGGPESIQMGSMPQAKQHITSGQM
HRGHMPPLTSAQQALTGTINSSMQAVQAAQASLDEVSELPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGANGQQLLGAAKNLACAVSDMLKTAQPANAEPRQILLQAAGNVGQASGELLQHIGESDT
DPRFQFLGNGAFRGSRRTTLSRGQMLDMLMHLAKAVANAAAALVLKAKNVAQKTEDSAQQ
NRVIAAATQCALSTSQLVACTRVVAPTISSPVCQEQLIEASKLVAKSVEGCVEASQGATA
DEHLLKQVGAAATGVSQALNELLQHIKQYASGGQPIGRHGEATDRILDVTENIFSSMGDA
GEMVRQARILAQATSDLVNAIKADAEGETDLENSRKLLSAAKLLADATAKMVEAAKGAAA
NPDSEEQQQKLREAAEGLRMATNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAA
SSNKNPAAQQQLVQSCKVVADQIPMLVQGVRGSQSQPDSPSAQLTLIGAGQNFLQPGAKM
VTAAKATVPTIGDQASAMQLSQCAKNLASALAELRTAAQKAQEACGPLELDNALALVRGL
EKDMREAKASAAEGKLRPLPGETLEKCSQDLGSSTKAVSSAIAQLISEATQGNENYAGQA
ARDVAQALRALASAARGVAANTDDPQARSAMLDCAADTMDKSSNLIEESKRALAKPGDPD
SQQRLAQVAKAVSQALNRSVNCLPGQRDVDNALRTVGEASKKLLAGSFPPSSKSFQEAQA
NLNQAAAGLNQSANELVHSSRGTTQDLTKASGNFGKDFNEFLDAGVDMAGQSQSKEDQTQ
VVTNLKTISMSSSKLLLAAKVLSTDPSSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQ
KECDNALRELETVRGMLVNPTEAVNDTGYFDCIDSVMENSKVLGEAMAGISHNAKNSNLP
EFGDSVSSASKALCGLTEAAAQGAYLVAVSDPNSHAGHKGLVDPAQFARARQSIQMACQN
LVDPACTQSQVLSAATIVAKHTSALCNACRVASSKTSNPVAKRQFVQSAKEVANSTANLV
KSIKALDGAFNEDNREKCKEATGPLIEAVDNLTNFASNPEFASVPAQISHEGIAAMEPIV
AAAKTMLESSTGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRE
CDEAIEVLNNCIREVDQASLAAISQQLTPREDMSHEALHEQMAASVQEISNLIEPVAIAA
RSDASQLGHKVSQMVSYFEPLIMAAIGTASKILNSQQQMNVLDQTKTLAESALQMLYTAK
EAGGNPKAAHTQEALEESVQMMKEAVDDLGGTLGEAASAAGAVGGMVNSISQAINTMEDG
LGVDPDGTFVDYQTTMVKTAKAIAVTVQEMVTKSNANPDDLGGLANQLTNEFGQLAGEAK
YAAITAESDEIGSHIKEKVSELGYSCTGLVTKAGALQCSPNDSFTKKELIDSARKVSEKV
SHVLAALQAGNRGTQACITAASAVSGIIADLDTTIMFATTGTLNRENAETFADHREHILK
TAKALVEDTKLLVSGAGASQERLAQAAQSSVGTITRLADVVKLGAASLGSEDPETQVVLI
NAVKDVAKALGDLISATKAAAGKQHDDPAMLQLKNSAKVMVTNVTSLLKTVKAVEDEATK
GTRALESTIEHIKQELNVFNSPEPPPKTTTPEEFIRMTKGITLATAKAVAAGNSCRQEDI
IATANLSRRAMADMLNACKQAAYHPEVSQEVQVRALRFGTECATGYLGLLEHVLVPIIMK
PTHDLKQQLATYSKRVAGSVTELIQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAA
KKLEQLRPRTKPKEADESLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIP
ANAVDDGQWSQGLISAARMVAAATNNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLV
ACKVKADQDSQTMKRLQAAGNAVKRASDNLVKAAQKAAFDRHDDQAVMVKSKMVGGIAQI
IAAQEEMLRKERELDEARRKLAHIRQQQYKFLPTELQEDGQDQ
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atggtggccttgtcactgaagatcagcgtggggaacgtggtgaagaccatgcagttcgag
ccctccaccatggtgtacgacgcctgtcgcatgatccgggagagagtccctgaggcacag
cttggccagcccaacgactatggcctcttcctgtctgacgaggaccccaagaagggcatc
tggctggaggcgggaaaagccctggactactacatgctgaggaacggggacaccctggag
tacaagaagaaacagcgacccctgaagattcgcatgttggacgggaccgtgaagacagtc
atggtggacgactccaaaatcgtcagtgacatgctcatgaccatctgtgcgaggataggc
atcacaaactacgacgagtactcgctggtgcacgacgtggtggaggagaagaaggaggag
accatggggacgctgaagagggacaagacggccatgagggacgacaagaagatggagaag
ctcaagcagaagctccacacggacgacgagttgaactggctggatcacgggcggacgctg
cgtgagcagggcatcgaggagacggagatgctgctcctcaggaggaagttcttctactcc
gaccagaacgtggactccagggaccccgtgcagctgaacctgctctacgtgcaggctcgt
gatgacatcctgaacggctcgcaccccgtctccttcgacaaggcctgcgacttcgccggg
ttccagtgccagatccagtttggggaccacaacgagaccaagcacaagccagggttcctg
gacctgaaagagttccttccaaaagaatacatcaagaacaaaggcgagaaaaagatcttc
caggcccacaagaactgccagaacatgactgagatcgaggccaaagtcagctatgtcaaa
ctggcccgctctctcaagacctacggagtgtccttcttcttggtcaaggagaagatgaag
ggcaagaacaagctggtgccgcgtctgctgggcatcaccaaggagtgcaccatgcgagtg
gacgagaagaccaaggaggtcatgcaggagtggagcctgaccaacatcaagcgctgggcc
gcctcccccaagagcttcacgctggacttcggcgactaccaggatgggtactactccgtg
cagaccacagaaggagaacagatcgcccagctgattgccggctacatcgacatcattctg
aagaagaaaaagagcaaagaccactttggcttagagggcgatgaagaatccaccatgctt
gaggactctgtgtcacccaaaaagtccacggtgctccagcagcagttcaataagatgggg
aaggtggagacgggctccgtggcgctgcccgccatcatgcgctcgggggccggcgggccg
gagagcatccagatgggctccatgccacaggccaagcagcacatcaccagcggccagatg
caccgcgggcacatgccccctctgacgtcggctcagcaggctctcactggaaccatcaac
tccagcatgcaggcggtgcaggcggcccaggcctccctggacgaggtgtcggagctgccc
cccctgggcacggacgcggcctcacaagcttggcgtaagaacaagatggacgagtccaag
cacgagatccactcccaagtggacgccattactgctggaacagcctccatggtcaacctt
accgcaggtgacccggcggagaccgactacacggcggtgggctgcgccgtgaccaccatc
tcctccaacctgacggagatgtccaagggcgtgaagctgctcgccgcgctcatggaggac
gagggcgccaacgggcagcagctcctgggcgccgccaagaacctggcctgcgccgtctcc
gacatgctgaagaccgcccagcctgccaacgccgagccccgccagatcctcctgcaggcg
gccggcaacgtgggccaggccagcggggagctgctgcagcacatcggagagagcgacaca
gacccacgattccagttcctaggtaacggagctttcaggggttccaggcggacgaccctc
agtaggggtcaaatgctggacatgctgatgcatctggccaaggctgtggccaacgccgcc
gccgccctggtgctgaaggccaagaacgtggcgcagaagaccgaggactccgcccagcag
aaccgggtcatcgctgccgccacccagtgcgccctgtccacctcacagctggtggcttgc
acccgggtggttgcccccaccatcagctccccggtgtgtcaggagcagctgatcgaggcg
agcaagctggtggccaagtcggtggagggctgtgtggaggcctcccagggcgccaccgcc
gacgagcatctgctcaagcaggtgggcgccgcggcaaccggcgtctcgcaggcgctcaac
gagctgctgcagcacatcaagcagtacgccagcggcggccagcccatcggtcgtcacggc
gaggccaccgaccgcatcctggacgtcaccgagaacatcttcagctccatgggagacgca
ggagagatggtgcgtcaggctcgcatcctggcccaggcgacctctgacctggtcaacgcc
atcaaggccgacgccgagggcgagacggacttggagaactcccgcaagctgctgtcggcc
gccaaactcctggccgacgccaccgccaagatggtggaggctgctaagggagctgcagcc
aaccctgacagcgaggagcagcagcagaagctgcgtgaggctgcggagggtctgcgcatg
gccaccaacgccgccgcccagaacgccatcaagaagagactggtcaacaagctggagaat
gcagcgaagcaggcagccgccgccgccactcagaccattgccgccgcccaacatgccgcc
tcgtccaataagaaccctgctgcccagcagcagcttgtgcagagctgcaaggtggtggct
gaccagatccctatgctggtccagggagtgagaggcagtcagtcccagcccgacagccct
agtgcccagctcaccctcatcggagccggccagaacttcctacagcctggtgccaagatg
gtgactgcagccaaggccaccgtgcccaccatcggcgaccaggcctccgccatgcagctc
agccagtgcgccaagaacctggccagcgccctggcagagctccgcaccgccgcccagaag
gctcaggaggcgtgcgggccgctggagctggataacgcgctggccctggtgcgcggcctg
gagaaggacatgcgggaggccaaggcctcggccgccgagggcaaactcagacccctgcct
ggagaaacgctggagaagtgctctcaggacctgggctccagcaccaaggccgtgagctcg
gccatcgcccagctgatcagcgaggccacccagggcaacgagaactacgccggtcaagct
gccagagatgttgcccaggctctgcgcgccctggcctccgcggcccgtggcgttgccgcc
aacacggacgacccccaggcccgcagcgccatgctggactgcgccgccgacaccatggac
aagtcgtccaacctcatcgaggagagcaagagggccctcgccaaacccggggaccctgac
agccagcagagactggcccaggtggcgaaggccgtgtcccaggccctgaacaggagtgtg
aactgcctgcccggacagagagatgtggacaacgccctcaggactgttggagaggccagc
aagaagctgctggctggttcattcccaccgagcagcaagagcttccaggaggcgcaggcc
aacctgaaccaggcggcggccgggctcaaccagtcggccaacgagctggtgcattcctca
cgcggcaccacccaggacctgaccaaggcctcgggcaacttcggcaaggacttcaacgag
ttcctggacgccggggtggacatggccggacagtcccagtccaaggaggaccagacgcag
gtggtcaccaaccttaagaccatctccatgtcctccagcaagctgcttctggccgccaaa
gtcctctccaccgaccccagctcccccaacctcaagaaccagctggccgctgccgctcgt
gccgtcacagacagcatcaaccagctcatcaccatgtgcacccagcaggccccgggccag
aaggagtgtgacaacgcgctgagggagcttgagacggtgagaggcatgttggtgaatcca
actgaggccgttaacgacacgggctacttcgactgcatcgatagcgtcatggagaattcc
aaggttctgggtgaagccatggctggaatctcccacaacgccaagaacagcaacctgccg
gagtttggggactcggtcagctcggcctctaaggccctgtgtgggctgacggaggcggcc
gcccagggggcctacctggtggcggtctccgaccccaacagccacgccggacataagggc
ctggtcgacccggcccagttcgccagagcgaggcagagcatccagatggcctgccagaac
ctggtggacccagcctgcactcagtcacaggttctctccgccgccaccattgttgccaaa
cacacgtctgcgctctgcaacgcctgccgcgtcgcctcctccaaaacatccaaccctgtt
gctaagcgacagttcgtccagtcagccaaggaggtggcgaacagcaccgccaacctcgtc
aagtccattaaagccctggacggagcctttaacgaggacaaccgtgagaagtgcaaggag
gccaccggcccgctgatcgaggctgtggacaacctgaccaacttcgcctccaacccggag
ttcgccagcgtaccggcccagatcagccacgagggtatcgctgccatggaacccatcgtg
gccgcggcgaagaccatgctggagagttccacgggcctgatccagacggcccgctccctg
gccgtaaaccccaaagacccgcccaagtggtccgtgctggcgggccactccagaaccgtc
tcggactccatcaagaagctcatcaccaacatgagagataaggcgcctggacagagagag
tgtgatgaggccatcgaggtgctcaacaactgcatccgtgaggtggaccaggcctctctg
gccgccatcagccagcagctcacccccagagaggacatgtcccacgaggctcttcacgag
cagatggccgcctcggtgcaggagatcagcaacctgatcgagccggtggccatcgctgcc
cgctccgacgcctctcagctgggacacaaggtgtctcagatggtgagctacttcgagccc
ctcatcatggccgccatcggcacggcctccaagattctgaacagccagcagcagatgaac
gtgctggaccagaccaagaccctggccgagtccgccctccagatgctctacacggccaaa
gaggccggaggcaaccccaaggcggcccacactcaggaggctctggaggagtctgtgcag
atgatgaaggaggccgtggacgacctgggcggcaccctgggcgaggccgccagtgccgcg
ggcgcggtgggaggcatggtcaactccatctcccaggccatcaacaccatggaggacggc
ctgggcgtggaccccgacggcaccttcgtggattaccagaccaccatggtcaagaccgcc
aaggccatcgcagtcaccgtgcaggagatggtcaccaaatccaacgccaaccctgatgat
ctcggaggcctggccaaccaactgaccaatgagttcggacagctcgccggtgaagccaag
tatgccgccatcaccgcagagagcgatgagattggctcccacattaaggagaaggtgtct
gagctgggctacagctgcacaggcttggtcaccaaagccggggcgctccagtgcagcccc
aacgacagcttcaccaaaaaagagctcatcgacagcgcccgcaaggtctccgagaaggtg
tcccacgtgctggctgcgctccaggccggtaaccgtggcacccaggcctgcatcacggcc
gccagcgccgtctctggcatcatcgctgacctggacaccaccatcatgttcgccaccacc
ggcacgctcaaccgcgagaacgcagagaccttcgccgatcacagagagcacatcctgaag
acggccaaggctctggtggaggacaccaagctgctggtgtccggggcgggggccagccag
gagaggttggcgcaggccgcccagtcctccgtgggcaccatcaccaggctggccgacgtg
gtcaagctgggggccgccagcctgggctccgaggacccagagacacaggtggtcctcatc
aacgcagtcaaagatgtggccaaggctctgggtgacctcatcagtgccaccaaggcggcg
gcgggcaaacagcacgatgacccggccatgctgcagctcaagaactctgccaaggtgatg
gtgaccaacgtgacctcgctcctgaagacggtgaaggcggtggaggacgaggccaccaag
ggcaccagggcgctggagtcgaccatcgagcacatcaagcaggagctgaatgtgttcaac
agccccgagccccctccaaagaccaccactccagaggagttcatccgcatgaccaaaggc
atcacgttggccaccgccaaagcagtggctgctgggaactcttgtcgccaggaggacatc
atcgccacggctaacctgagcaggagggccatggccgacatgctcaacgcctgcaagcaa
gcagcctaccacccagaggtcagtcaggaggtgcaggtgagggccctgcgcttcgggacc
gagtgtgccactggatacctgggcctgctggaacacgtgctggtgccgatcatcatgaag
cccacccacgacctgaagcagcagctggccacctactccaagcgcgtggccggctccgtg
accgaactcatccaggccgccgaggccatgaaaggcacggagtgggtggaccccgaggac
cccacggttatcgccgagaacgagctgctgggcgcggcggcggccatcgaggcggcggcc
aagaaactggagcagctgaggccgcggaccaaacccaaggaggccgatgagagcctgaac
ttcgaggagcagatcctggaggcggccaagtccatcgccgcggcgaccagtgcgctggtg
aaggccgcctcggccgcccagagggagctggtggctcagggcaaggttggtgccatccct
gccaatgctgtggacgatggccagtggtcccagggtctcatttctgctgcgcgcatggtc
gctgcggccacaaacaacctgtgtgaggcggcgaactccgcggtgcagggccacgccagc
gaggagaagctcatctcctccgccaagcaggtggccgcctccaccgcccagctcctggtg
gcctgcaaggtcaaggcggaccaggactcccagaccatgaagaggctgcaggctgctggc
aatgctgtcaagagggcctcagacaacctggtgaaggccgcccagaaggccgcattcgat
cgccatgacgaccaggcggtcatggtgaagagcaagatggtgggcggaatcgctcagatc
atcgcggcccaggaggagatgctaaggaaggagcgtgagctggacgaggcccgcagaaag
ctggcccatatccgccagcagcagtacaagttcctgcccacggagctccaggaggacgga
caggaccaatga
DBGET
integrated database retrieval system
