Clupea harengus (Atlantic herring): 105894635
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Entry
105894635 CDS
T09045
Symbol
ddx4
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105894635 (ddx4)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105894635 (ddx4)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105894635 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105894635
NCBI-ProteinID:
XP_031434057
UniProt:
A0A6P8GEZ3
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All DBs
Position
12:26616869..26629383
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AA seq
667 aa
AA seq
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MDDWEEKDAGATSTTSSFASGGNSWNSGGQKNSFSKNDNEGSSWNSGGGFGERGGSRGRG
GGGGGFSRSFSSGGDENGNKEDGDGSSWNGGGRGGFRGRGGGGSRGGFRDSNNSDNAENG
NDGEFRSDFGRGRGRGRGGGGGFRQEGGGEDGFQGSGGFMGRDEEFVPKGKRDNESGGDG
ENAGPKVIYVPPPPPEGDDAVFAKFQTGINFDKYDDILVDVSGSNPPPAIMTFVEASLCE
SLSKNISKSGYVKPTPVQKYGIPIIMAGRDLMACAQTGSGKTAAFLLPILQTLMRDGVAA
SQFSEQQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGISTGYTIREVLKGCN
VLCGTPGRLLDIIGRGKVGLSKLRYLVLDEADRMLDMGFEPDMRRLVGSPGMPPKEERQT
LMFSATYPEEIQRLAADFLKVDYLFLAVGVVGGACSDVEQLIMEVNQFSKRDQLLEILKT
TGNERTMVFVETKRKADFIATFLCQEKLPTTSIHGVNREQREREQALCDFRTGKCPVLVA
TSVAARGLDIEHVQHVVNFDLPNNIDEYVHRIGRTGRCGNTGRALTFFDPEADTPLARSL
VKVLSGAQQEVPDWLEKVAFGAHGTTGFNPRGNVFASTDTRKGGSFQTDKQAPSAVSSAA
ADDEEWE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaagaaaaggatgcaggcgctactagcactacctcaagttttgccagt
ggaggaaactcgtggaacagtggagggcagaaaaacagcttctccaaaaacgacaatgag
ggaagttcttggaacagtggaggaggatttggggaaagaggtggaagcagaggccgtggc
ggaggaggaggcggattcagccgttcattttcctcaggaggtgatgaaaacggaaataag
gaagatggtgatggcagctcctggaatggtgggggcagaggggggtttcgaggcagaggt
ggaggaggctcaagaggaggatttagagattcaaataactctgataacgctgaaaatgga
aatgacggtgaattcagaagtgactttggaagaggaagaggacgtggcagagggggcggt
ggtggcttccggcaagagggaggaggtgaagacggattccaggggagtggaggtttcatg
ggaagagatgaggaattcgttcccaaaggaaaaagggacaatgaaagtggaggtgatgga
gaaaatgccggtccgaaggtgatctatgttcctcccccacccccggaaggggacgatgct
gtctttgctaagttccagacaggcattaattttgataagtatgatgacatcttagtggat
gtgagtggaagcaacccgccgccagccatcatgacctttgtagaagcaagcctgtgcgag
tcgctgagcaaaaacatcagcaagtcaggttatgtgaaacccacgccagtgcagaagtat
ggcatccccatcatcatggcaggcagggacctcatggcctgcgcccagactggatcagga
aaaaccgctgccttcctgttgcccatcctgcagacgctgatgagagacggggtggcagct
agccagttcagcgagcagcaggagcctgaggccatcatcgtggcccctacccgagagctc
atcaatcagatctacctggaggcgcgcaagtttgcctacgggacgtgtgtgcgcccggtg
gtggtgtatggagggatcagcactggatacaccatcagggaggtcctgaagggctgcaac
gtgctctgtggaactccaggaagactgctggacatcatcggaagagggaaggttggattg
agtaaattgcgttacctggtgctggacgaggcggaccgcatgctggacatgggctttgag
ccggacatgcgcaggctggtgggctctcccgggatgcccccgaaagaggagaggcagact
ctgatgttcagcgccacttatccggaggagatccagaggctggctgcagacttcctgaag
gtggattacttgtttctggctgtgggtgtggttggaggagcctgtagtgatgtcgagcag
ctgatcatggaggtgaaccagttctccaagagggaccagctgttggagatactgaagact
acaggaaatgagcgtacaatggtgtttgtggaaaccaaacgcaaggcagatttcatcgcc
acgtttctctgtcaggagaagttgcccacaactagcatccatggtgtgaaccgtgagcag
cgggagagggagcaggctctctgtgacttccgcactgggaagtgtcctgtcctggtggcc
acgtccgtcgctgccaggggcttggacattgagcatgtgcaacacgtggtgaactttgac
ctccccaacaacatcgatgagtatgtgcatcgcatcgggagaaccggtcgctgtggcaac
acgggtcgtgccttgacgtttttcgacccagaggcagacaccccgctagctcggtctctg
gtcaaagtcctttcaggggcccaacaggaagtgccggattggctcgagaaagtagccttt
ggagcacatgggaccactggatttaacccgcgaggcaatgtgtttgcctcaacagacacg
aggaagggtggttccttccaaacagacaagcaagcgccgtcagcggtgtcaagcgccgca
gcagacgatgaggaatgggagtga
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