Clupea harengus (Atlantic herring): 105894673
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Entry
105894673 CDS
T09045
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105894673 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105894673 (tbpl1)
03021 Transcription machinery [BR:
char03021
]
105894673 (tbpl1)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105894673 (tbpl1)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105894673 (tbpl1)
RNA polymerase III system
TFIIIB
105894673 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
105894673 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
105894673
NCBI-ProteinID:
XP_012676669
Ensembl:
ENSCHAG00000022560
UniProt:
A0A6P8GEF9
LinkDB
All DBs
Position
15
Genome browser
AA seq
186 aa
AA seq
DB search
MEPGGDVALDIIVSNVVAVFRVRCHLNLRTIALEGLNVIYKPEVGKVLMKLRKPKITASI
WSSGKIICTGATSEEDAKLGARRLARVLQKLGFKVRFSDFKVVNVLAVCSLPFQIRLIQF
AKNNRPIASYEPELHPAVSYRIKHLKATIQIFSTGSITVTGPSVQNVATAVEQIYPLLFE
CGRALR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaacccggtggcgatgtggcgctggatatcatcgtttccaacgtcgtggccgtcttt
agagtcagatgtcatctgaatctgcggaccattgcactagaaggattgaatgtcatatac
aaaccagaagtcgggaaagtgttgatgaagctacgtaaaccgaaaatcaccgcctctatc
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaggatgccaagcttggt
gcccgaaggctcgctcgcgtcttgcagaaacttggtttcaaggtgaggttctcggacttc
aaggtggtaaacgttctggctgtctgctctctgccctttcaaatccgtctcatccagttc
gccaagaacaaccggcccatcgccagttacgagccggagctccaccctgctgtttcatac
cgcattaaacacctcaaggctacaatacagatcttctccaccggcagcatcactgtcaca
ggaccaagtgttcagaatgtggccactgcggtggaacagatctacccgctgctgttcgaa
tgtgggagagcactgagataa
DBGET
integrated database retrieval system