Clupea harengus (Atlantic herring): 105894720
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Entry
105894720 CDS
T09045
Symbol
tfr1b
Name
(RefSeq) transferrin receptor 1b
KO
K06503
transferrin receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
char04145
Phagosome
char04216
Ferroptosis
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105894720 (tfr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105894720 (tfr1b)
04145 Phagosome
105894720 (tfr1b)
09143 Cell growth and death
04216 Ferroptosis
105894720 (tfr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105894720 (tfr1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105894720 (tfr1b)
04090 CD molecules [BR:
char04090
]
105894720 (tfr1b)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
105894720 (tfr1b)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105894720 (tfr1b)
Exosomal proteins of colorectal cancer cells
105894720 (tfr1b)
CD molecules [BR:
char04090
]
Proteins
105894720 (tfr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
PA
TFR_dimer
DUF3553
Motif
Other DBs
NCBI-GeneID:
105894720
NCBI-ProteinID:
XP_031439365
Ensembl:
ENSCHAG00000013989
UniProt:
A0A6P8GX95
LinkDB
All DBs
Position
17:26938543..26952162
Genome browser
AA seq
788 aa
AA seq
DB search
MAVAINQARTSISKMFNGEPRSYTRFNLAQNNDVDSSQVEMKLSSDVEDEVGNPEDGHAP
ITYTQSPLQNYKKVCYLALGTLVIFILGYLVGYVSHRKPDAAAESCPSVAPVITSPEEEG
QDEGPKVAYLPGLSWSDISTLLEQKLSPDAFSTKLLSEFSLPRDQTHEAGSDGDNHLANK
VLAVFKDLNMQSWNDEHHVKLPRPSSDNPSKVLFGTEEIGAPKGFLAYSEVGSKTGRVVY
GNYGLRDDLSACIDKKVDLNGSVLLLRAGRISFADKVANAAKHGVVAVLIYPDPSDYDFQ
SSTELYGHVHLGSGDPYTPGFPSFENTQFPPSRSSGLPSVVAQTITGSMALKIFQKMGGD
SAPPNFQGKLSGLSTYKLGSANDTVTVTVNSVLTETAIHNVFGVIKGNEESDRYVVIGAQ
RDSWGPGVARSTVGTTVLVELARAVSEMIRNDHVSLRRSLVFASWSAGEYGNVGATEWQE
GYLASLNMKAFTYINLDGVVTGRQKFKATASPLLYDLLQKTLKQVKNPLSTGKSLYDQHA
GSDWEASVLESMKMNDAAYPFLALSGIPSISFRFCKDEGEYLYSGTDLDSLDHLRYATGS
KVGELAVAAAQVAGQMALRLVHDHLLPLDVERYGKEIRKQVVEVNSRVSRLKQTADLDQD
LSEALSVKWLNSAYGDYGRAYRNLQTTIENSDLEDKEMCRIINDRIIKVEHNLLSPYVTV
REVPFRHIFFGSGEHTMQALLDHLSALQQKAPESNADLFRNQFALATWTIQSCANDLDGP
VWEMNNEI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagcgatcaatcaagcaagaacatccatttccaaaatgtttaatggggagccc
cgttcgtacacgcgattcaacttggcccagaacaacgatgtggacagcagccaagtggag
atgaagctgtcgtctgatgttgaagatgaagtcggtaaccctgaagatggccatgccccc
atcacctacacgcagagtcctctgcagaactacaagaaagtctgctatctggccctgggc
acgttggtgatcttcatcttgggttatctggttggctacgtcagccatcgtaaaccagat
gcggcggctgaatcctgcccctcagtggcacctgtgattacctctcctgaagaagaaggt
caggatgaggggcctaaggttgcatacctaccaggtttgagttggagtgacatctccacc
cttctggaacagaaactgtcccctgatgccttttctacaaaactcctcagcgagttctcc
ctccccagggaccaaacccacgaggcaggaagcgatggagataaccatcttgctaacaaa
gtcttggctgtgttcaaggacttaaacatgcagtcttggaacgacgagcatcatgtcaag
ctaccacgtccatccagtgacaacccaagcaaagtcctctttggtactgaagaaattgga
gcacccaaaggtttcttggcttacagtgaagttggaagcaaaaccggcagagttgtgtat
ggtaactatgggttacgagatgatctctcagcctgtattgacaagaaggtagacctcaac
ggcagtgttctgctgctaagggctggacggatcagttttgcagataaggttgccaacgct
gctaaacatggtgtagtggcagtgctgatctaccctgacccctcagactacgacttccag
agctcgacagaactttacggacacgtccatcttggctcaggtgatccctacacgccaggg
ttcccatcctttgaaaacacccagtttcccccgtccaggtcttcaggtcttccttctgtc
gtggcacagacgattactggatctatggccctcaagatcttccagaagatgggaggtgac
tctgcccccccaaactttcaaggcaaactcagtggattgtctacttacaaactgggcagt
gccaatgacacggtgactgtgactgtcaatagtgtactcactgaaacggccatccacaat
gtatttggggtcatcaagggaaatgaagaatcagatcgttatgttgtcatcggggcccaa
agggactcctggggcccgggtgttgcgaggtccaccgtgggcaccaccgtgttggtagag
ctggccagagcggtctcggagatgatcagaaacgaccacgtcagcctcaggaggagcctg
gtgtttgccagctggagtgccggcgagtacggaaacgtgggcgccaccgagtggcaggag
ggctacttggcgtcactcaacatgaaagccttcacctatattaacctggatggagtcgtc
acaggtcgtcagaagttcaaggccactgccagtccattgttgtatgatctactccagaag
actttgaagcaggtgaagaacccattgtccactggcaagtctctatatgatcagcacgct
ggatccgattgggaggcttctgtacttgaatctatgaaaatgaacgatgctgcgtacccc
ttccttgctctttccggcatcccatccatctcattccgcttctgtaaggacgagggggag
tacctgtactctggaaccgatttggacagtcttgaccacctgcggtatgccacgggctca
aaagttggtgaattagcggtggcagctgcacaggtggctggacagatggccctacggctg
gttcacgaccacctgcttcccctggacgtggagcgctacggaaaggaaatcaggaagcaa
gtggtcgaggtcaacagccgcgtcagccgactcaagcagactgcggatttggatcaagat
ctgtctgaggctttgtctgtgaaatggctgaacagtgcatatggcgactatggtcgtgcg
taccgtaatctccagacaaccattgaaaacagcgacctggaagataaggagatgtgccgc
atcatcaacgaccgcatcataaaggtggagcacaatctgctttccccctacgtgactgtg
agagaagtgcctttccgccacatcttcttcggttcaggtgaacacacaatgcaagccctg
ctggaccatctcagtgccctccaacaaaaggctccggagtctaacgccgatctgttccgc
aaccaattcgccttggctacctggaccatccagagttgtgccaacgacctcgacggtccc
gtctgggaaatgaataatgagatctaa
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