Clupea harengus (Atlantic herring): 105894753
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Entry
105894753 CDS
T09045
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X2
KO
K13342
peroxin-5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105894753 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105894753 (pex5)
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105894753 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_11
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_12
TPR_7
ANAPC3
TPR_20
TPR_Slam
MAS20
TPR_9
PEX18_PEX21_C
Connexin50
Atrophin-1
Secretin_N_2
Ysc84
Motif
Other DBs
NCBI-GeneID:
105894753
NCBI-ProteinID:
XP_012676754
Ensembl:
ENSCHAG00000009790
UniProt:
A0A6P3VNC7
LinkDB
All DBs
Position
11:23245585..23256352
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AA seq
645 aa
AA seq
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MAMRELVEAECGGANPLMKLTGHMTQEGGAWRHRATPNIPPTPIEIASEEELVNEFLQGP
SRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWASEFLPGADAAAAAASA
PGQVGLGEGADADWTKEFISEVSDPGRWAEEYLEQSEEKLWLGDLGEKERDKEWTQEYQP
GDELKQTANELLAKVEDPKLQNTEFLRFIRQIGEGSVTVEDSTGKQDTDKAQAKEAQRWA
SSLNQVSVDSAESWVDEFATGGPDFQQAKAAVESDVDFWEKLQQEWEEMAKRDAESHPWL
SDFDQMLSSSYDKGYQFDEENPYLSHDDPLAEGVKRMEAGDIPGAVLLFECAVQREPENQ
LAWQYLGTCQAENEQEFAAISALRRCIDLKKENLTALMALAVSFTNESLHRQACETLRDW
LRHNPKYRHILEHSEREKERDGAREREKERERFGSLLPEGLFTEVQSLFLSAASSDPNLV
DPQLQCGLGVLFNLSGEYDKAVDCFTAALSVTPQDYLLWNKLGATLANGSRSEEAVAAYR
RALELQPGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQQQASVEGPVGRAGAAATMMS
DNVWSTLRMALSMMGESSLYAAADRRDLDTLLAHFCQREGEPGTE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtggaagcggagtgtgggggagccaatcccctcatgaagctg
actggtcacatgactcaagaaggaggggcttggaggcatcgggcaacacccaatattcct
cctacacctattgagatagcaagtgaggaagagttggtcaatgagttcctgcagggcccc
tcacggcctcctcatagttttgacatggggcagctcctggaggagatgcagcagattgac
cagcagagctacagacaagctccacagcgagcccctggggtggctgcgctggcactgtcc
ggtgactgggcttcagagttcctgcctggcgctgatgccgccgccgccgccgcctccgca
ccagggcaggtgggcctgggcgagggagcagatgctgattggacaaaggaattcatcagt
gaagtgtcagatcctggtcgctgggcagaggagtatctggaacaatcagaggagaaactg
tggctgggagaccttggagagaaagagagagataaagaatggacacaagaataccagcca
ggagatgagctcaaacaaacagccaatgagcttcttgccaaagtggaagaccctaagttg
cagaatacagagttcctgcggttcattaggcagattggcgagggcagtgtgactgtggaa
gacagtacaggcaagcaggacacagataaagctcaggccaaggaggcacagcgctgggcc
tccagcctaaaccaggtgtcggtggattctgctgaatcgtgggtagatgagtttgccacg
gggggaccagatttccagcaggcaaaagctgcagtggagagcgatgtggacttctgggag
aagctgcagcaggagtgggaggagatggccaagagggatgcagagagccacccctggctg
tctgactttgaccagatgctcagctcctcctacgacaagggctatcagtttgatgaggag
aacccgtatctgtcccatgatgatcctctggcagagggggtgaagaggatggaggcagga
gacattccgggggcggtgctgctctttgagtgtgcagttcagcgggaaccagaaaaccag
ctggcttggcaatatctgggaacctgtcaagcagaaaatgaacaggagtttgcagctata
agtgccctccgcagatgtatagatctgaagaaggagaatctgactgcgctgatggctttg
gctgtcagcttcaccaacgaatcactgcacaggcaggcctgtgagacactgcgagattgg
ttaagacacaaccccaagtaccgccacatcctggagcacagcgaacgggagaaagagagg
gatggtgccagagagagggaaaaggagagggagcgatttggatcccttttgcctgagggt
ctgttcacagaggtgcagtccctgttcctgagtgcggcatcctctgaccccaaccttgtg
gacccccagctgcagtgtggtctgggtgttctctttaacctgagcggagagtatgacaaa
gccgtcgactgcttcactgctgctctgtcggtcaccccacaggattacttgctgtggaac
aaactaggtgccaccctggccaacgggagccgctcggaagaggctgttgccgcctacagg
agagccttggaactgcagcctggatttgtgcgcagtcgctacaacctgggcatcagctgt
gtcaatttgggagctcacagagaggcggtggagcactttctggaagctttatccctccag
cagcaggcttctgtggaggggcctgtgggcagggccggggctgcggcaaccatgatgtcc
gacaacgtctggtccactctgcgcatggccctgagcatgatgggagagagctcactgtac
gctgcggcagaccgccgtgacctggacacgctactcgcacacttctgccaacgggagggg
gagcctggaacggaatga
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