Clupea harengus (Atlantic herring): 105894775
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Entry
105894775 CDS
T09045
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X2
KO
K24495
myomesin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105894775 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105894775 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
105894775 (myom1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
C2-set_3
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
105894775
NCBI-ProteinID:
XP_012676773
Ensembl:
ENSCHAG00000010694
UniProt:
A0A6P3VNH1
LinkDB
All DBs
Position
17:complement(26027142..26062165)
Genome browser
AA seq
1599 aa
AA seq
DB search
MSGSLPFYQKHHRHYDRGYRSRETQSAISQYQQSANSYSSHSRSSSQGIAATYSALDESK
LSPMPKRAKPTYLAMDKENQIIGYVVPIFRGSHEFESGLSDTEEARLKESSAYMARRGLF
SSDMETERSDYTSRRTMMRESAERISLTKRIHDNEEHHKRMNEDNLMHTPEFVIKPRSHT
VWEKQCVRLHCTVSGWPEPRVVWYKNNVSIDPMTDPGKYKVESKYNVHSLEINRCDFDDT
AQYRVSAMNSKGELSSFASVVVKRFKGAVEESLPVPSQYGYVCEYGITFETHIVEKFDVS
FGREGETMSLGCTVIIYPSLQRFKPEIEWYRDDKLLTPSKWAQMHWSGDRATLTLTHLNK
EDEGLYTLRVTTKSGYQTHSAYVFVRDGEAEVAGAPASPLDVVCHEANKDYVIISWKQPA
VDGGSSILGYFVDRCEVGTPHWIQCNDTPMKFARYPVTGLVEGRSYTFRVRAVNKAGMSH
PSRASLPAAAMDPADRARKGTSAPWTGQIIVTEEEPAEGVIPSKPGELTVTEATRNYVVL
SWKPPGERGHEGIMYYVEKCVAGTDSWQRVNTEIPVKSPRFALFDLSEGKAYSFRVRACN
SAGVGEPSEPTEATTVGDKLDIPSAPGRVVPTRNTDTSIVVSWVASKDAKELVGYYIEAS
IAGTNVWEPCNNKPVKGTRFFCHGLITGESYVFRVRALNAAGLSECSQESEAIEVKAAIA
SPEPPFGISVLECVRDSMVLAWKQPPFIGGADITGYFVDYRKMVGGVPGKWHEANIKSVG
ERAYRVSDLQETVDYQFQVRAANMAGVGIPSLPSEIFKCEEWTIAVPGPPHDLQALEVRS
TSLVLLWKPPVYQGRDQVNGYYVDIKEAAAGIEAWRGVNEKACLNRYLKINILKDGETYV
FRVRAQNKAGVSKPSEPTEPVLAETKPGTKEMVVDVDDDGVISLNFACDSLTPDSTFIWS
KNYEEMTDTTRMTIETKGGKSRAMFNTPDMEDVGIYSCVVSHTDGSSGSYTLTEEGLKEL
LKISHDHKFPIIPLKTELAVELLEKGRVRFWLQAEKISANGKVDYVFNDNTISQGEKYKM
NFDKNTGVIEMFMDTLADQDEGTFTFQMQDGKATNQSSLVLIGDVFKQLKKEAEFMRKEW
IRKQGPHFVEYLSYEVTEDCIVRIRCKVGNIKKETVALWYKDGREIQANEKLDFSEGVLN
LEIAQISKKDAGVYEVILKDDRGKDTSTLDLTDKGFKDLMNQVFGVIANSSTPLKIQSTE
EGIRLYSFVSYYNDELHVTWHFKDAHITFSDRIKSGVVGEQLWLQISEPTEKDKGKYAIE
FFDGKGGLQRTVELSGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTIQEGKALNL
TCNISGDPVPEVTWLKNEREMVSDDHYILKFEAGKFASFTITQVNTADSGKYSILVKNKY
GTESAEFTLKVTESLGDLGGTTYLTDADGNVIVGQPPPKTPKAASPKPPKTPTPKPPTPT
PKSPTPPTPTSQTPVPVTPTPETPTPPTPTPTPEVPDSSAPPTPTATPTPGDGPKEKKKK
KVTKRKDSVVLKAPGGSKDATPETTPASTPAATPVPPEE
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcattgccattctatcagaaacaccaccgacactatgatcgtggatatcgt
agtcgggagacccagtctgctatcagccaataccagcagagcgccaacagctactcctct
cacagcaggagcagctcccagggcattgcagccacctactctgctctggatgagagcaag
ctgagtcccatgcccaagcgggcgaagcccacctacctggccatggataaggagaaccag
atcatcggctacgtagtgcccatcttcaggggcagccacgagtttgagagcgggctttcg
gacacggaggaggcgcgcttgaaggagagctcggcctacatggcccgccgcggcctcttc
tccagcgacatggagacggagcgcagtgattacacgtcccgccgcaccatgatgagggag
tccgccgagcgcatctctctcaccaagaggatccatgacaacgaggagcaccacaagcgt
atgaacgaggacaacctgatgcatacccccgagtttgtgataaagccgcgctcacacact
gtgtgggagaaacagtgtgtgaggctccactgcactgtgtctggatggcccgagcccaga
gtggtctggtataagaacaatgtcagcatcgaccctatgactgaccccgggaagtacaaa
gtggagagcaagtacaatgtccactcactggagatcaacagatgtgactttgatgacacg
gcacagtatcgcgtgtcggccatgaacagcaaaggagagctctcctctttcgcctctgtg
gtcgtcaagaggttcaaaggtgcagttgaggagtctcttccagttcccagtcaatatggc
tacgtttgtgaatatggcatcacctttgagacccacattgtggagaagtttgacgtgtcg
ttcggccgtgagggcgagaccatgagcctgggctgcacggtcatcatctacccctctctg
cagcgcttcaagcctgagatcgagtggtacagagacgataagctcctgactccatccaag
tgggctcagatgcattggagcggagacagagccacgctcacactcacacacctcaacaag
gaggacgagggcctgtacaccctccgcgtcaccaccaagtctggttatcagacacactct
gcctatgtctttgtcagagatggcgaagcggaggtggcaggcgcccctgcttctcctctg
gatgtggtgtgccacgaggccaacaaggattacgtcatcatctcctggaagcagcccgct
gtggatggcggcagctccattctgggttactttgtggaccggtgcgaggttggcaccccg
cactggatccagtgcaacgacaccccgatgaagttcgcccgttaccccgtcaccggactg
gtggagggccgcagctacaccttccgtgtgcgcgctgtcaacaaggctggcatgagtcac
ccgtcccgcgcctctctgcccgccgccgccatggatcccgctgaccgcgcccgcaaaggc
acctccgctccctggactggccaaatcattgtgacagaggaagagccagcagagggtgtg
attcccagcaaaccaggtgaactaactgttaccgaggcaacaaggaactacgtggtcctg
agctggaagccccctggcgagagaggccatgagggtatcatgtactatgtggagaagtgt
gtggccggcacagacagctggcagcgcgtcaacacagagatccctgtgaagtccccccgc
ttcgctctgtttgacctgtccgaggggaaggcgtacagcttccgtgtgcgcgcctgtaac
tctgcaggcgtgggagaaccctccgagcctaccgaggccaccactgttggagacaagctg
gatatcccatcagcacctggtcgtgttgtcccaactcgtaacacagacacgtctatcgtg
gtgtcatgggtggcctctaaggatgctaaagagctggttggatattacatagaggccagc
atcgctggtacaaatgtgtgggagccctgcaacaacaaacccgttaaaggcacaaggttt
ttctgccatggccttatcacgggtgagagctatgtgttcagggtccgggctctgaacgca
gcagggctgagtgaatgctcccaggaatcggaggccatcgaagtcaaagctgccattgcc
tcccctgagccgcccttcggcatcagtgtgctggagtgcgtcagagactctatggtgctg
gcctggaagcagccgcctttcattggaggtgctgacatcaccggctactttgtggactac
cgtaagatggtcggtggagtgccaggaaaatggcacgaggccaacatcaaatctgtcggc
gagagagcatacagggtgtcagacttgcaggagaccgttgattaccagttccaggtacgc
gccgcaaacatggctggcgtgggcatcccatctctgcccagtgagatcttcaaatgtgag
gagtggaccatcgccgtaccaggaccaccccatgacctccaagccttggaggtgcggtcc
acgtccctggtacttctgtggaaacctccggtgtaccaaggtcgtgatcaggtcaacggg
tactatgttgacatcaaggaggctgcggcgggtatcgaagcttggagaggtgtcaacgag
aaggcctgcctcaacagatacctgaagatcaacatcctgaaggacggagagacgtatgtg
ttccgtgtccgtgcgcagaacaaagctggagtgagcaagccctcagaaccgacggaaccg
gtcctggctgagactaaaccaggcacaaaggaaatggtggtagacgtggacgacgacggt
gtgatttcactcaactttgcatgtgattcactcacgccggactcgaccttcatctggtcc
aagaactacgaggagatgactgatactacacgcatgaccatcgaaaccaaagggggcaag
tccagggccatgtttaacaccccagacatggaggacgtcggcatctactcctgtgtggtc
tcacacacggatggctcatctggcagctacactcttactgaagaggggctgaaagaactt
ctgaaaatcagccacgaccacaaattccccattattccactgaagacagagctggctgtg
gagctgctggagaaaggccgagtgcgcttctggctgcaagctgagaagatctccgctaat
ggaaaagtagactatgttttcaacgacaatactatctcccagggagagaaatacaagatg
aactttgacaagaacaccggtgtgattgagatgtttatggacactctggccgatcaggat
gaaggaacattcaccttccagatgcaagacggaaaagccaccaaccagtctagcctggtg
ctcattggagatgtcttcaaacagctgaagaaggaggccgagttcatgaggaaagaatgg
atcagaaagcaaggtcctcactttgtggagtacttgagctacgaggtcactgaagattgc
atcgtgaggatcaggtgcaaggttggaaacataaagaaggaaactgttgctttatggtat
aaagatggacgtgagatccaggcaaatgagaaattggacttcagtgagggggtactcaac
ctggagatcgcacagatctctaagaaggacgcaggagtgtatgaggtgattctgaaggat
gaccggggaaaggacacttccacgctcgacctcacagacaaagggttcaaagacctgatg
aaccaagtgtttggcgtgattgcaaactcatctaccccactgaagatccagagcactgag
gaaggcatcagactgtactcctttgtcagctactacaatgatgagctgcatgtcacctgg
catttcaaggatgcacacatcactttcagcgaccgcattaagagtggtgtggttggagag
cagctgtggctgcagatctcagagcctacagagaaggacaagggcaagtacgccatcgag
ttcttcgacgggaaaggaggcctgcagaggaccgtagagttgtctggacaagcatttgat
gatgcctatgctgagttccagagactgaaagcggcagccatcgcagagagaaatcgtgct
cgtgttgcgggtggtctaccagatgtggtcaccattcaagagggcaaggccctcaacctg
acctgcaacatctcgggcgaccccgttccagaggtcacctggctgaagaacgagcgggag
atggtgtctgacgaccactacatcctcaagttcgaggcgggcaagtttgccagttttaca
atcacccaagtgaacacggctgattccggcaagtacagcatcctggtgaagaacaagtac
ggcacagagagtgctgaattcaccctgaaagtgacagaaagccttggtgatttgggcggg
acaacttatctgaccgatgctgatggcaatgtgatagttggacagccaccaccaaagaca
cccaaggcagcaagccctaagccccccaagactcctacacctaaaccacccacacccaca
ccaaaatccccaaccccacccacccctacgtcacagaccccagttccagtcacccctaca
cccgagactccaactcccccaaccccaaccccaaccccagaggttcctgatagctccgca
ccaccgaccccaaccgccacacccacacctggtgatggacccaaagagaagaagaagaag
aaggtgacgaagagaaaagactctgtagttctgaaagcccctggtggaagcaaggacgcc
acccccgagacaacgcctgcgtccacacccgctgccacccctgttccaccggaggaatag
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integrated database retrieval system
