Clupea harengus (Atlantic herring): 105894849
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Entry
105894849 CDS
T09045
Symbol
rev3l
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105894849 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105894849 (rev3l)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105894849 (rev3l)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
105894849 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
105894849
NCBI-ProteinID:
XP_031437960
Ensembl:
ENSCHAG00000016422
UniProt:
A0A6P8GT79
LinkDB
All DBs
Position
15:complement(2983841..3026614)
Genome browser
AA seq
3092 aa
AA seq
DB search
MFSVRIVNADYYIASPIKDLDVCYSEFRESGVKKVPVVRIFGATPGGQKTCLHLHGIFPY
IYIPYDGHGQQPERYLRQVAFSIDRALNVSMGNPSSNAQHVFKVTLVSGMPFYGYHAKEK
RFMKIYLYNPQMVKRVCELLQGGAVMNKSFQPHEAHIPYLLQLFIDYNLYGMNLINLGAV
KFRRSARKAAEASSSEGPSNRSLGSPWKSPVTSTLSESVLGGTFMRWDEDALPCSLVLEE
VTKQSTCELEVDAVAIDVLNRLEIESQIGRNPGLQAIWEDEKQRRREKNESSQIETPESQ
DRGLLDAVESERIFMKRFKEILRENEFNVTQSGMGGDSEGDEPFPGLSLHPDVLTPEDLL
APPASQVEMHRDTPTDTKRPGGREADSAIVDEEAILSLLENSQTFLPLSQTSNQSVLENS
HDRVLDELLAGLEDSRFQADLGRQATFANSGSCPYNSDEEEEAPELEREEAELSMLMSQR
WDNDILEHSSSQRLCLKDKGESSSEEPQDSSEEEMDWSGNSSLLXDLSIPQLDGAADDNS
GELHPPKDRACRGMHSSLTATDQILAKLNPFQSDAVHMEPPSSAKILLECKHPEHRQALA
LEREESLDKHFISKGSISQESSECSTGFKVNKEIPYIQPVKHPIPCSMANRAEVSTIGVD
KMAVHPLYNYENSAIALNKSDPDSLPFGSGKITQSRKKYSSIKNMEKNHLSLLQNHRSFS
LCYSELMSCPTTADIELSQKDCKSPVPRSVEQASSPLEEGMLLDPQEGEMGSDGEEGDVG
ELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLTRPAKKNVMSKPGDGSGKPSQP
EQRRSRLSKKASRTATQRKDNVLDSPTSDIQPPKDDTDLTTITPVCPKNKETNEEPEMET
SEPKTEGHVPNEPVKAPIEDKLPPLTELPAKVGCTKVSSLPGSKYTLRAKRKMSYDSEDG
EHSSAAVKQATLPQESLKDNCVLSGQEFKNQKRRKISKKEPPIIIKYIIINRFKGQKNML
VKMAKVNAEEQHVILTPDKLEQYNRLAPLKVFWPKVPESTAVKFPPLEQKLKKPTKKKAK
MNPTTKKANLSAPPKSRSKPVVKAQNVKNALPLPSLSAPWPCYNDLTDDYSTEYSDVMVE
LGYLSDRAPSPTDSTPPRCWSPSDPILESTVSDHLINPFNDPCLGSPYQDTTSDSQGRGS
QRRSRTTKPRKMATGSPRRKTKATKQSDPQPAKENIKQVSTQGAVRKQKKDLEMTLVCGQ
DGSSSKNTRKPRKKKQVNETETSIARNCEDQEGTLPASEPSSTEGSSLQTSVAKQGDDTS
VVVRESRTQTVTTLVEPKTEKSEINISEPYQSIALDLKTELGGEASTPADQSDKCSQSSS
TQFEISPFQRSISSPASGSIGYPCSVITYSRSMSQTSNHKSESVPSPSNPYEFKSEPSDL
EESPDSTQVPEVALKAAARARRRTSKKKEKSEEASTQSEAFQIKSKPALTSGHESVPKDE
KPHTGPRNGATTLTNEMPSGLAVLKELLQKRQRLGLSQEVRAASQTQNATASADTATSSE
NKSTKTKRAPSTTTRKPRAPRNQTPKEKKPRNRKNQNCKQENPKLEPPLSDDSPTFLADA
GFDSCYSIEDSLSPELPHNYNFDINAIGQTGFSGLYLGSQFVVADKILPQKFLSDFNQEA
ISALNIGLKSTKERTLSGEERKPSSGPTSPDLFDKTSCENNLSLSVLESDRRGRDWASLG
KHHSLSPFQDFHCEKRDFLFSLDSFLPLTSTSFADNGASPVGDVMDGNDIMTSTTPSSSP
RSVSSLSQMRSCSQSLKGAGGAHILKPLMSPPSREEIVSTLLTLDLSEATYQEPFCSDPS
DAPLKPREISGRKLTIETRLANELNEFNGDLSLEGLQFWKAAFVAMTKPGSSSTHGPDTS
EATEDHKERSPSTGDQKVILLPCRSAPSRERVQIWLQARKQFEQLQRQRRATVAQEMTEL
TRERNQPLVVGVLSCGANPEKDQNRIERTSSLRVIRKRGLNLSIRKSQPDLVVSGSSPKD
MKSERDSGSKDGYYYDDDDKDGDCDSSEQSISPDSPVLPPWQRTILPSSTPRDYDTEQRK
ITRVLSSPSPGGFHDEDATSPENRPQKEFLSPSPLPIKPMDEDFPSPYVLHSTPVVSRRR
RSRAESLSTSTSSLPMTEEAEPEFQKLQQRRGSHTDALRRVLLTTQMKNQFTAMNVVKKD
NSQIEGPSICNSYGFKVSMQNLQEAKALHEVQYLTLMSMELHARTRRDLEPDPEFDPICA
LFYSFSSDAPLPDSDKMQITGAIVVDKDCHSQEQGSRTTAPLLVRSGVSGLQVTYASDEK
ELFKEVARIILKYDPDILVGYEVQMHSWGYLFQRASTLGVDLCQKLSRVPDDAKENRFAA
EKDEYGADTMSEIHIVGRIVLNLWRVMKTEAALTSYSFENVAFHILHQRFPFFSHRTLSD
WFDHNTDLYRWKVVDHYVSRVCGCTQMLQQQDLIGRTSELARVFGIQFYHVLTRGSQYRV
ESMMLRIAKPMNYIPVTPSPQQRAQQKAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIV
IAYNYCYSTCLGHVESLGTHDEFKFGCSSLHVPPDLLYELRNDITVSSNGVAFVKPSVRK
GVLPSMLEEILNTRIMVKQSMKAAKGDRALMRLLHARQLGLKLIANVTFGYTAANFSGRM
PSVEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNE
IAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKDPVLDAKGIETVRRDGC
PAVAKILERSIKLLFETRDISQVKMYVQRQCVKILEAKASMQDLTFGKEFRGSGSYRPGA
CVPALELTRRMMAHDRRLEPRVGERVPYVIVYGVPGVPLIQLVRRPLEVLQDPSLRLNAT
YYISKQILPPLSRIFTLIGVDVFSWYQELPRVQKAWCSAPGGGAGREETGRKGTISQYFT
TLHCPVCDELTQLGVCERCRAEPQRVAVTLHQELRLWESQQDQLLKICRNCSGSGERQVP
CVSLDCPVLYKLSRVTRQLSKGPYLHQLLEQF
NT seq
9279 nt
NT seq
+upstream
nt +downstream
nt
atgttttcggtccgcattgtcaatgctgattattacatagctagtcctattaaggatttg
gacgtgtgctattcggaattcagagaaagtggagtgaagaaggtgcctgttgtccgaatc
ttcggcgcaacacctggtggccagaagacgtgtctgcacctccatggcatcttcccttac
atctacatcccctacgacggccacggccagcagcccgagcgctacctgcgccaggtggcc
ttcagcatcgacagggccctcaacgtctccatgggcaacccctcttccaacgcccagcac
gtcttcaaggtgacgctggtgtctggcatgcctttctatgggtaccacgccaaggagaag
cggttcatgaagatctacctgtacaatcctcaaatggttaagagggtgtgtgagttgctc
cagggaggagcagtcatgaacaagagcttccagccgcacgaggcccacatcccctacctg
cttcagctcttcatcgactacaacctttacggcatgaacctcatcaacctgggagccgtc
aagttccgccgctccgcacgcaaagcagcagaggcctcaagcagtgagggccccagcaac
aggagcctggggagcccctggaaaagccctgtcacctccacactctctgagagcgtgctg
gggggaacgttcatgcgctgggacgaggacgctctaccctgctctctggtcctggaggag
gtgaccaagcagagtacgtgtgagctagaggtggacgcagttgccatagacgtcctgaat
cgcctggagattgagagtcagattgggaggaacccgggactgcaggccatctgggaggac
gagaagcagaggagaagagagaagaacgagtcttcccaaattgaaacccccgaatcccag
gaccgcgggctgctagacgccgtggagagtgagagaatcttcatgaagaggttcaaggag
attctacgtgaaaatgaattcaatgtgacccaatctggcatgggaggtgacagcgagggg
gacgagcccttccctggtctctcactacacccagatgtcctgaccccagaggacctgctg
gctcctcctgccagccaggtagagatgcacagggacacaccaacagacaccaagagacct
ggtgggagggaagctgactcggctattgtggatgaagaagccatccttagtctactggag
aacagccagaccttccttcccctctcgcagacatccaaccagtctgtcctggagaacagt
cacgacagggtcttggatgaactcctggctgggcttgaggactcaaggtttcaggctgac
ctgggcaggcaggccacttttgccaacagtgggagctgtccctacaacagcgacgaggaa
gaggaggcgcctgagctggagagggaggaggctgagctcagtatgctgatgtcgcagaga
tgggataatgacattctggagcactcttctagtcaaagactctgtctgaaggacaagggg
gagagctccagtgaggagccgcaggactcttcagaggaggagatggactggagtggaaac
agctccctcttanatgacttgtccataccccagttggatggcgctgccgatgataacagt
ggtgaattgcatccaccgaaagacagagcctgccgaggaatgcattcatcactgactgct
actgatcagatccttgccaagctgaatccctttcaaagtgatgccgtccacatggagccc
ccatcttcagccaaaatcctcctggagtgcaaacaccctgagcacaggcaggccctggcc
cttgaaagagaggaatcgttagacaagcactttatctcgaaaggctccatcagccaggag
agcagtgaatgttcaactgggtttaaagttaataaagagataccttacattcagccggtc
aaacaccccattccctgcagcatggccaatagggcagaggtgtccacgattggtgtggac
aaaatggctgtgcaccccctatacaactatgaaaacagtgccattgcccttaacaagtca
gacccagacagcctaccctttggaagtggaaaaatcactcagagtaggaaaaaatacagc
agtattaaaaacatggaaaagaaccacttgtctcttctccaaaaccacaggagcttctca
ttgtgttactcagagttaatgagctgccccacaacagcagacattgaattgagccagaaa
gattgtaagagtcctgtgccaaggagtgtggagcaggcatcaagtcccttggaagagggc
atgctccttgatccccaggaaggtgagatgggcagtgatggagaggagggagatgtcggc
gagctgaaaatcaggtatgaggattatcaggagaacaagacggaacgaaccattgtggca
cagcaggaggcccactataagtttttcccaagtgtcatactctcaaactgcctcaccaga
ccagcaaaaaagaatgtaatgagtaaacctggggatggttctggaaaacccagtcagcca
gagcagagacggtcaaggctaagtaaaaaggcatcccgtactgccacccagaggaaagat
aatgtgttagacagccccacctctgatatccaacctccaaaagatgacacagatttgaca
acaattacacctgtgtgtccgaagaacaaggaaactaatgaagagccagaaatggagaca
tcagaacctaagactgaaggccatgtacctaacgaaccagtcaaagctcccattgaagac
aaactcccaccactcactgagctaccagccaaagtaggttgcaccaaagtgtcaagtttg
cctggtagcaaatacaccttgagggcaaagcggaaaatgagctatgacagtgaggatgga
gagcactctagtgctgctgtaaagcaggctaccttgccacaggaaagcctgaaagacaac
tgcgtgctcagtggtcaggagtttaagaatcaaaagcgccggaagatttccaagaaagag
ccaccaatcatcataaagtacataataatcaacagattcaaaggtcagaagaacatgttg
gttaaaatggctaaagtgaacgcagaagagcagcatgtgatcttgaccccagataaattg
gaacaatacaacagactggcccctttaaaagtcttctggcccaaggttccagagtcaact
gcagttaagtttccacccttggaacaaaagttaaagaaacccacaaaaaagaaggccaaa
atgaaccccaccacaaagaaagctaacctttctgcacctccaaaatccagaagcaagcca
gttgtcaaagctcagaatgtcaaaaatgcattacctttacccagtctgtccgctccttgg
ccttgttacaatgatctcacggatgactactcaacagagtattcagatgtgatggtagag
ttaggttatctgtctgacagggcccctagtcccacagactcaacaccaccacgttgttgg
tccccctctgaccccatcttggaatcaaccgtcagtgatcacttaatcaatccgttcaat
gatccctgtctaggctccccttatcaagacaccacctcagattcgcaaggcagagggtct
cagcgcagaagtcgtacaactaagcccaggaagatggctactggaagtccaagaagaaag
actaaggccacaaagcaatcagaccctcaacctgccaaagagaacataaagcaggtcagc
actcaaggtgctgtgaggaaacaaaagaaagatctcgagatgacccttgtatgtgggcag
gatggttcttcaagtaaaaataccagaaagcctcgtaaaaagaaacaggtgaatgaaaca
gaaacctccattgccaggaattgtgaagatcaggagggcactctgcctgcctcggaaccc
tcatcaactgagggctcctcccttcagacgtcagtagcgaagcagggtgacgatacttca
gttgttgttagggagtcgagaactcagactgttacaactttagttgaaccaaagacagag
aagagtgaaatcaacatcagtgagccataccaaagcatagcacttgatctcaaaactgag
ctgggtggtgaggccagtacaccagctgatcagtcagacaaatgcagccagagttcctca
acacagtttgaaatctccccatttcaaaggagcatctcctctccagcctctggaagtatt
ggatatccttgctcagttatcacatatagtagatctatgtcacagacttcaaaccataag
tctgagtctgtgcccagtccatcaaatccctatgaattcaaaagtgaaccctctgacctt
gaggagagtccagactctacacaggtgccagaggttgctcttaaggctgcagctagggca
agaaggcgcacttcaaagaagaaggaaaagagtgaagaagcaagcactcagtctgaagct
tttcagattaaatccaagcctgcacttacaagtggtcatgaatcggtacccaaagatgaa
aaaccccatacaggcccaaggaatggagcgaccactttaacaaatgaaatgccttcagga
cttgctgttttgaaggagcttctacagaaaagacagagattgggactgagccaagaagtc
cgagctgcctcacagactcaaaatgccactgcatcagctgatactgccacaagttctgag
aacaagtcaacaaaaaccaagagggccccatccaccactacacgaaagccaagggcacca
agaaaccaaactccaaaggagaaaaaaccaaggaacaggaaaaaccaaaattgcaagcag
gaaaaccccaagcttgagcctcctttgtcagatgatagcccaacgttcctggcagatgct
ggtttcgacagctgctattcaattgaagacagtttatcaccagaactccctcataactac
aactttgacataaatgccattggccaaactgggttttccggtctctacttgggcagtcag
tttgtggttgctgacaagattctcccacagaagtttctgagtgattttaaccaggaagca
atctcggctctaaacattggactgaaaagcactaaggagaggacactgtcaggtgaagaa
cgtaagccttcgtcaggacctaccagtcccgacctatttgacaagacatcatgtgaaaac
aatttatctttgtctgtgcttgagtctgataggaggggaagagattgggcatcattgggg
aaacatcacagtcttagtccttttcaagacttccactgtgagaagagagacttcctcttt
tctctggactctttcctgcctttaacctcaacttcgtttgctgataatggtgcatcccca
gtgggagatgtgatggatggaaacgacatcatgacctcaaccacacccagcagctctcca
cgttctgttagttcactttcacaaatgaggtcttgcagccagtcccttaagggcgcagga
ggagcccacatcctcaaacctctcatgtctcccccgagccgagaggagattgtcagcacc
ctcctcactctagacctctcggaggcgacctaccaggagccattctgcagtgatccatct
gacgctcctctaaaacccagggaaatcagtggacgcaagctgacaattgagaccaggtta
gcaaacgagctgaatgagttcaatggggatttgtctttagagggtcttcaattttggaag
gctgctttcgttgcaatgacgaaaccaggatcctcatccacacacggacctgacacttca
gaggccaccgaggaccataaagaacgcagtccgtctactggtgatcagaaagtcatcctg
ctgccctgcagaagtgcgccaagccgagagcgagtacagatatggctgcaagcaaggaaa
cagtttgagcagcttcagagacaaaggagggccacagtagcccaggagatgacagagttg
acaagggaaagaaatcagccattggtagtaggtgtgctgagttgtggggctaatcctgaa
aaagatcaaaacaggattgagaggacctcctcactgcgggttatcagaaaaagaggttta
aatctgtccatccgtaaaagccagcctgatttagtggtgtctggaagctcccccaaggac
atgaaatcagagagggacagcggttcaaaggatggctattattatgatgatgatgataaa
gatggtgattgtgactcctctgagcagtccatatctccggactctcctgtgttgccacca
tggcaacgtacaattctgccgagctctactcccagggattatgacacggagcaaaggaaa
ataacaagggtgttgtcatctcccagccctggtggctttcatgatgaagacgccacctct
cctgaaaacagaccccagaaagagtttctctctccctctccattacccatcaagcccatg
gatgaggacttccccagtccttacgtcctgcacagtacaccagttgtcagccgaagaagg
agaagcagagcagagtcactatctacaagtaccagcagtctgcccatgactgaagaagcg
gagcccgaatttcagaaactacagcagaggagaggaagccatacagatgcattaaggaga
gtgctcctgaccactcagatgaagaatcagttcacagctatgaatgtcgtaaagaaagac
aactctcagatagaggggccgtccatctgcaactcttacggcttcaaggtcagcatgcag
aatctgcaggaggccaaagcactgcatgaggtgcagtacttgaccttgatgagtatggaa
cttcatgcacggacacgccgggacttggagccagacccagagttcgaccccatatgtgcc
ttattctacagcttcagctcagacgcccccctgcctgattctgacaagatgcagataaca
ggtgccatcgtggtggacaaagactgccattcccaggagcaaggctcaagaactacagca
cccctgctggttcgatcaggcgtttcaggattgcaggtcacttatgcctcagacgagaag
gagctcttcaaggaagtcgccagaattattctgaagtatgacccagacatcttagtaggg
tatgaggtgcagatgcattcctggggttacctcttccagcgggcatcaacactgggggtg
gacctgtgccagaagctctcacgggtgccagatgatgcgaaggaaaaccgcttcgctgca
gagaaggacgagtatggtgccgacaccatgtcggagatccatattgtgggtcgcattgtc
ctcaacctctggagagtgatgaaaacagaggcggcactgaccagctacagctttgagaac
gtggcctttcatattctgcaccagcgctttcctttcttcagccaccgtaccctctctgac
tggtttgaccacaacactgacctctacagatggaaagtggtggaccactatgtgagtcgt
gtgtgcggctgcacgcagatgctgcagcagcaagacctcattggcaggaccagtgagctt
gcacgagtcttcggcatccagttctaccacgttctgaccagaggctcgcagtaccgcgtg
gagtcgatgatgctgcggatcgccaagcccatgaactacatccccgtgacgcccagcccg
cagcagagggcgcagcagaaggcgccgcagtgcatcccgctggtgatggagcctgaatca
cgcttctacagcaactccgtggtggtgctggacttccagtcgctctacccctccatcgtc
atcgcctacaactactgctactccacctgcctcggccacgtggagagcctcgggacacat
gatgagttcaagtttggctgcagttctcttcacgtcccccccgatctcctctatgagctc
cgcaatgacatcacggtgtcgtccaacggcgttgcttttgtaaagccctctgtgcgtaag
ggtgtgctgcccagcatgctggaggagatcctgaacaccagaatcatggtgaagcagtcc
atgaaggccgccaaaggcgaccgtgccctcatgcgcctgctacacgcccggcagctgggc
ctcaagctcatcgccaacgtcacctttggctacacggccgccaacttctccggcaggatg
cccagtgttgaggtgggtgacagcattgtgcacaaggccagggagacattggagagggca
atcaagctggtcaatgacactaagaagtggggggcccgtgtcgtctatggggatacggac
agcatgtttgtcctcctgaagggagccaccaaagagcaggcgttcaaaattggcaatgag
attgcagaggcagtgactgccaccaaccccaaaccagtcaagctcaagtttgagaaggtt
tacctcccctgcgttctccagaccaagaagcgctatgtgggctacatgtatgagagcctg
gaccagaaagaccccgtgctcgacgccaagggaatcgagacggttcgccgagacggctgc
ccggctgttgccaagattcttgagcgctccatcaagctgctgtttgagacgcgtgacatc
agccaggtgaagatgtatgtgcagcgacagtgcgtgaagatcctggaggccaaggccagc
atgcaggacctgaccttcggcaaggagttcagaggcagcggctcctacagacctggagcc
tgtgtgcccgcgctggagctcaccaggcggatgatggcacatgacaggcgcctggagccg
cgggtgggtgagcgggtgccctacgtgattgtctatggcgtgcccggcgtacccctcatc
cagctggtccggcgccccctggaggtgctgcaggaccccagccttcgcctcaatgccacc
tactacatcagcaagcagatcctgccgccgctgtcacgcatcttcacgctcatcggagtg
gacgtcttcagctggtaccaggagctgcccagggttcagaaggcctggtgctctgcgccc
ggagggggagctggccgtgaggagacgggcaggaagggcaccatctcccagtacttcacc
acgctgcactgccccgtgtgtgacgagctgacgcagctgggcgtgtgtgagcgctgcagg
gccgagccccagcgtgtggccgtcaccctgcaccaggagctgcggctgtgggagagccaa
caggaccagctgctcaagatttgcaggaactgcagtggaagtggcgagcgccaggtccct
tgtgtgtccctcgactgtccagtcctctacaagctgtctcgggtcacccgtcagctgtcc
aagggcccgtacctgcaccagctcctggagcagttctga
DBGET
integrated database retrieval system
