Clupea harengus (Atlantic herring): 105894886
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Entry
105894886 CDS
T09045
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105894886 (adamts13)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
105894886 (adamts13)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
105894886 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Adt-1
Reprolysin_3
Reprolysin_5
TSP1_CCN
TSP1_spondin
Reprolysin_4
Reprolysin_2
TEX19
CUB
Motif
Other DBs
NCBI-GeneID:
105894886
NCBI-ProteinID:
XP_031426778
UniProt:
A0A6P8FEA8
LinkDB
All DBs
Position
7:24719020..24739623
Genome browser
AA seq
1564 aa
AA seq
DB search
MAAGTAALALLGIILSLPRGETARPSARETSFLKSLDPQDLEYYFGTISADSVPEFELLW
TDCLWDEVSAGPRLPRRCSLHTQSESLQLGRSEREGSLSGPNVVETALNSTVSTVRRSQE
GGCETLEVLGPPYARAVLSLCRGYMHGVIVREGKRIHIRPLLQRHLPLAPADKPPHGLAL
MGVHHQQQPAGPGAATDPSPEAALIGHQQRSSGPALPTHTGYSRRQRRSALSSEVSHLEL
LVVVGPDVQQVHRQDTERYILTNLNIASELLRDATLGANLRVHLVRMIILTEPEPEIQMT
TNISSSLRSVCQWSHKVNPANDTDPLHADLLLYITRFDLVLPDGNKLVRGVTQLGGVCTS
QWSCVITEDTGFDLGVTIAHEIGHSFNINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQC
SRAQLQSFFSAGKADCVADLPVMGGSLQDWKPGLYYGVDDQCRIAFGRSARACTFTANDM
TACRVLSCHTAPGDQTSCTRLLVPLLDGTECAPDQWCLKGRCVSPSTLSGSMVVHGSWSS
WPQFSPCSRTCGGGVSFRKRQCNNPRPAFGGRVCEGVDTEAELCHRQPCVSTQLDFMAQQ
CSQTDHQPLHLSPGQALHYTWVPAVGHVTGHTQCKLMCRSEGEDFMVSRGSKFIDGTRCE
ADWAVDPGTVTACLEGLCEEFGCDGVLHSGKVEDMCGVCGGDGSTCHLTSLSYEGGETRD
YVTFLTVPINATQVRILNSRPIFTHLAVLVGHQYVVSGRGDIALNTTYPSPLEDEHLTYH
LYLTPDLLPRMEEITLPGPVQENTHIQVYRKYGKEYGKQTDPSITYQYYIPDSAGEDTPR
GHWSAVTGPCTVTCGTGTQQAVSVCVEEGSQEQLDEAFCETSDRMPTVQRECSMPACPPS
WKEGEFGPCSASCGGGVQVRELSCVQTRGQEQVEVPASLCPQDSVPVAVGTCATQPCPAR
WQVSDPGVCSAVCGPGEAQQNVTCVQVQQGQESEVEPSLCPEPQPPDSVPCVVDVCPIGW
ESMAKQDHQTPPVVLARSKAVPVYVWSPVIGHCSSSCGNGTLQVWYTCVDHQSRFGVPEF
HCDPSSKPEPHTEPCNPTPCPPVRWRYMEGVCSVTCGAGMARRVLYCARSTEGTEREEVV
SDAECLSIPRPVDMVECNTEPCPARWKVLTGGVCSASCGLGVLERSVSCVQFERGQEQSV
PEDRCAQVKKPPSLVPCRVQLCTFRWDMREWSKCSVPCGYGIRMRPVSCVGPSHPDPVSP
LLCMHIPKPITIQACNAGDCGTHTHTHPTHPTHTHTTGQVPSQDSEEEANPDLMPLTSPT
PTHLSISPTAPQAAITTAMPTPPSQNNLCGQLLLQPSGTIDLRNVTQRRCIVAIGRPLDE
VINIKFESSTLDCKAKEYVAFYDRLILIRKCERMVGKELTSRTNVLLVRQGRITPGNGVM
LTYSSRKNPKTSHQQDCDVQLFAPTGVIENPTKGSSSEAQTCRVFLNAPPSLQIKIQAFS
MFNTTSTHTTYVLIRDVDTLKTTVFTGHQLFLWSSSGSRAEVEFHGQYQHIKGSFHAQYS
FIRP
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgggcacagcagcactagcgctgctcggcatcatactgtctctgccaagaggt
gaaactgcaagaccctcagctcgggagacgagcttcctgaagtctctggacccccaagac
cttgaatattactttggcaccatttctgctgattcagtgcctgagtttgagctgctctgg
acagactgtctttgggatgaggtgtcggccgggcccaggctgcccagacgctgttccctc
cacacccagagcgagagcctccagctgggccgcagtgagagggaagggtccctgtctggc
cccaatgtggtggagacggctctgaactctaccgtaagcaccgtgaggaggagccaggag
gggggctgtgagactctggaggtgctgggccccccctacgccagagctgtcctctccctc
tgcagggggtacatgcacggtgtgattgtgcgtgagggaaagaggatccacatccggcca
ctgcttcagaggcacctccccctggcaccagctgacaagcctccacacggcctggccctc
atgggagtccaccatcagcagcagcctgctgggcctggagcagctaccgacccttcaccg
gaagcagccctaatcggacaccagcagcgttcctctgggcctgcgcttcccacacacaca
ggatacagcaggaggcagcggcggtctgctctgagctcagaggtgtctcatctggagcta
ctggtggtggttgggcctgatgtccagcaggtgcaccgtcaggacacagagcgctacatc
ctcaccaacctcaacatcgcttcagagctcctgagggacgccactctgggagctaatcta
agagttcatctggtccgcatgatcatcctcactgagcctgagcctgagatccagatgacc
accaacatctcctcttctctgcggagtgtgtgtcagtggagtcataaggtcaacccagcc
aacgacacagaccctctacatgcagaccttctgctctacatcacgcggtttgacctggtt
ctacccgatgggaacaagctggtgaggggcgtgacacagttgggtggagtctgcaccagc
caatggagttgtgtcatcacagaggacactgggtttgatctgggcgtaaccatagcgcat
gagattggccacagctttaacattaatcacgatgggataggcaatacctgcagcagcagt
ggcttcatgatggcgtctgatggaggttataacagcgtggacctcacctggtctcagtgc
agtagagcgcaactgcagagcttcttcagtgcagggaaggcggactgtgtggcagacctg
ccggtgatggggggctctcttcaggactggaagccgggtctgtactacggggtggacgac
cagtgcaggatcgccttcggccgctccgccagggcctgcacattcacagccaatgacatg
acggcgtgtcgggtgctgtcctgccacacggcgcccggagaccagacgtcctgcacacgc
ctgctggtgcccctgctggatggcacagagtgtgcccccgaccagtggtgcctgaagggg
cgctgtgtgtctccgtccaccctgagcggctccatggtggtgcacggctcctggtccagc
tggccccagttctccccgtgctctcgcacctgtggaggcggcgtctccttcaggaaacgc
cagtgtaacaaccccagacctgcgtttggaggaagagtgtgtgaaggggtggacactgaa
gctgaactttgtcatcgccagccgtgtgtctctacccagctggacttcatggctcagcag
tgctcccagacggaccaccagccccttcacctctcccctggacaggccctgcactacacc
tgggtccctgctgtgggccacgtcacaggtcatacgcagtgtaagctcatgtgtcggtct
gagggggaggacttcatggtgagccgggggtcaaagttcatcgatgggacgcgctgtgaa
gctgactgggcggtggatccagggactgtcactgcctgtctggaagggttgtgtgaggag
tttggctgtgatggagtgttgcactctgggaaggtggaggacatgtgtggggtgtgtgga
ggggatgggtccacctgtcacctcacctctctctcttatgagggaggagagaccagagat
tacgtcacattcctgactgtgcccatcaacgccacacaggtccgcatcctcaactccaga
ccaatcttcacacacctggctgtgttggtggggcaccagtatgtggtgtctgggaggggc
gatatcgccctcaacaccacctacccctcccccctggaggacgagcacctgacgtaccac
ctgtacctcacgccagacctcctgccccgcatggaggagattaccctaccgggaccagtg
caggaaaacacacacatacaggtttatcgtaagtatggcaaggagtatggaaagcagacg
gaccccagcatcacctaccagtactacatacctgacagtgctggggaggacacacctcgg
ggccactggtcagccgtcaccggcccctgcacagtcacctgtgggacaggcacccagcag
gccgtgtctgtgtgcgtggaggagggcagtcaggagcagctggacgaggccttctgtgag
acgtctgacaggatgccaaccgtacagagggagtgcagcatgccagcatgcccacccagc
tggaaggagggtgagtttgggccctgcagcgcctcctgtggcggaggagtgcaggtgcgg
gaactgagttgtgtgcagactcggggccaagagcaggtggaggtgccagcctctctgtgc
cctcaggactccgtgcccgtggcagtgggcacctgtgccacccaaccctgccctgccagg
tggcaagtctctgacccgggtgtgtgttctgccgtgtgtgggcccggcgaggcccagcag
aacgtgacgtgtgtgcaggtccagcagggccaggagtccgaggtggaacccagtctgtgc
ccagagccgcagcccccagactcggtgccctgtgtggtggacgtgtgtcccatcggctgg
gagagcatggccaagcaggatcatcagactcctccagtggttctggcccgctcaaaggca
gtccctgtgtacgtatggagccctgtgattggtcactgttccagcagctgtgggaacggt
acactgcaggtgtggtacacctgtgtggatcaccagtcacggtttggggtgccggagttc
cactgtgacccctccagcaaacccgaaccccacactgagccctgcaaccccacgccttgc
ccccccgtcaggtggcgctacatggagggtgtgtgcagtgtgacgtgcggcgctgggatg
gcccgtagggtgctgtactgcgccaggagcacagagggcactgagagggaggaggtggtc
agcgacgcagagtgcctgtccatacccagaccagtggacatggtggagtgcaacactgaa
ccctgtcctgccagatggaaggttctgacggggggggtttgctctgcgtcctgcggtctg
ggtgtgttggagaggagtgtgtcgtgtgtgcagtttgagcgggggcaggagcagagcgta
cctgaggacaggtgcgcccaggtgaagaagccccccagcctcgtgccctgcagagtacag
ctgtgcaccttcagatgggacatgcgtgagtggagcaagtgctcggtgccgtgtggttat
gggatccggatgcgacccgtttcctgtgtgggcccgtcccaccccgacccggtcagcccc
ctgctctgcatgcacatccccaaacccatcaccatccaggcctgcaacgccggcgactgc
ggcacccacacacacacacaccccacacaccccacacacacacacacgacgggccaggtc
cccagccaggactcagaagaggaggcaaacccagacctgatgcctctgacatcaccgacc
cccacgcacctctccatcagcccaaccgccccgcaggccgccatcaccacggcaatgcca
accccgccctctcaaaacaatctgtgtggacagcttcttctccaaccatccggaaccata
gacctgagaaacgtaactcagaggagatgcatcgttgctattggtcgaccactggatgaa
gtcatcaacattaaatttgagtccagcactctggactgcaaggccaaggagtatgtggcc
ttctacgaccggctcattctgatcaggaagtgcgagaggatggtgggcaaagagctgaca
tcacgcaccaacgtcctactcgtgaggcagggccgtatcacccccggcaatggagtgatg
ctcacctacagcagcaggaagaacccgaagacgagccaccagcaggactgtgatgtccag
ttattcgcccccactggtgtgattgagaacccaactaaaggctcctcctccgaggctcag
acctgcagggtcttcctcaatgctccgccctccctccagatcaaaatacaggccttcagc
atgttcaacaccacttccacacacaccacatatgtgctgattcgagacgtggacacgcta
aagaccacggtgttcacgggccaccagctcttcttgtggagctccagtggcagccgggcg
gaggtggagttccacgggcagtaccagcacatcaagggctccttccacgcacagtactcc
ttcattaggccctga
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