Clupea harengus (Atlantic herring): 105894907
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Entry
105894907 CDS
T09045
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X2
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105894907 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105894907 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105894907 (usp5)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105894907 (usp5)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105894907 (usp5)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105894907 (usp5)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105894907 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
105894907
NCBI-ProteinID:
XP_012676924
Ensembl:
ENSCHAG00000010139
UniProt:
A0A6P3VPQ0
LinkDB
All DBs
Position
11:23279203..23289611
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AA seq
834 aa
AA seq
DB search
MAEVSEVLMSVLSTIRVPRPGDRVHKDECALSFASPESEGGLYVCMNSFLGFGSQYVDRH
HKRTGQRAYLQITRTRKAQKEDDNNSGSGDPPKKKPTRLAIGIEGGFDVEQEQYEEEVKV
VLFPGRQEVVSDDLASMPDVVRERVSLSMAGVMAADSVSHALQVQQWDGEVRQESRHAPE
LKQLDNGLKIPPSGWRCEICDLQENLWMNLTDGKINCGRRYFDGTGGNNHALQHFQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGINMMNMEKTERTMTELEIAVNQ
RVGEWEVIQESGATLRPLWGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQTKYVSNIDKIL
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPSDESSSSSEPRGDQVGIAARMFKALV
GRGHPEFSTNRQQDAQEFLLYFINMVERNCRSGMNPSEAFRFLVEERIVCQQSQKAKYTQ
RVDYMVQLPVPMDQATNTEELQEAERLREEAESSGAPPPPVPRACIPFSACLAAWSEPET
LTDFWSSAVQAKTTATKTTRFASFPDHLVIQVKKFTFGLDWVPKKLDVSIDVPDTLDLAA
LRGTGQQPGEELLPEVAPPPLMTPDVEVKAPVLDDSTVSQLCEMGFPLEACRKAVYYTGN
IGIDAAMNWVMGHMEDPDFSAPLVLPGCSSAPGTTPTESVSEEHLATIVSMGFSREQATK
ALRATSNVLERAVDWIFSHLDDLESMEVSEGGRSAGDSEGTREPPPGPRVRDGQGKYELF
ALISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYLYFYRRVAE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggttagcgaggttttgatgtcggttctgtccacaattcgggttccgaggccc
ggagaccgtgtccacaaagacgaatgcgccttgtcatttgcctctccggaaagtgaaggt
ggactgtacgtctgtatgaatagctttctgggattcggcagccaatatgtggaccgacat
cacaaaaggactgggcagagagcctaccttcaaattactcggactcgtaaagcgcagaag
gaagatgacaacaactctggctcaggtgacccccctaagaagaagcccacaagactggcc
ataggcatagagggtggctttgatgtggaacaggagcagtatgaggaggaagtgaaggtg
gtcttgttcccgggcagacaggaagtagtctcagatgatttggcatccatgcctgatgtt
gtgagagagcgggtgtctctgtccatggcgggtgtgatggcggcggactcagtgtcccat
gccctgcaggtgcagcagtgggatggtgaggtgcggcaggagtcccggcatgcacctgag
cttaagcagcttgacaacggtctcaagatcccaccaagtgggtggaggtgtgaaatttgt
gacctgcaggagaatctgtggatgaatctgacagatgggaaaatcaattgtgggaggagg
tattttgatggcactgggggcaacaaccatgccctccagcacttccaggagacaggctac
cccctagcagtcaaactgggcacaatcaccccagatggggcagatgtgtactcgtatgat
gaggatgacatggtcctggactccaaactcccagagcacctgtctcactttggcatcaac
atgatgaacatggagaagacggaacggacgatgaccgagctggagatagcagtgaaccag
cgtgttggggagtgggaggtgatccaagagtcgggggccactctgcggcccctctggggc
cctggcctcactggtatgaagaacctgggtaacagctgctacctcaactctgtcatgcaa
gtgctcttcaccgtgccggacttccagaccaagtacgtctccaacattgacaagattctt
gatgaggcgccaagtgaccccacccaggacttcaaaacccaagtagcaaagctgggctat
ggtctactgtctggagaatactctaaaccagctccggaccccagcgacgagtccagctct
tcctcagagccccggggagaccaggttggtatagcagcacggatgttcaaagcacttgtt
ggccggggccacccggagttttccaccaacaggcaacaggatgcccaggagtttctactg
tatttcataaacatggttgagaggaattgtcgttcaggcatgaatccctccgaggccttc
cgcttccttgtggaggagaggattgtgtgtcagcagtctcagaaagccaaatacacgcag
agggtggactacatggttcagttgcccgtgcccatggaccaggccaccaacacagaggag
ctgcaggaggccgagcgacttcgtgaggaggcggagtcatcaggagcccctcctcctccg
gtgcctcgggcatgcatccccttctccgcctgcctggcagcctggagcgaacccgagacc
ctcacagacttctggagctccgctgtgcaggccaagaccacagccacaaagaccacccga
tttgcctctttcccagaccaccttgtcattcaggtcaagaagttcacttttggtctcgac
tgggtccccaagaaactggacgtgagcattgatgttcccgacacgcttgatctggccgca
ctccgtgggaccggccagcagccaggggaggagcttctgccagaggtggccccaccccct
ctcatgaccccagatgtggaggtcaaagcccctgtgttggatgactccaccgtctctcag
ctgtgtgagatgggcttcccgctggaggcctgcaggaaggcggtctactacacgggcaac
atcggcatcgacgctgccatgaactgggtcatgggccacatggaagacccagatttctcc
gcccccctggtgttaccaggatgcagctccgcccccggcaccacccccacagagagcgtg
tccgaggagcacctggcaaccatcgtctcaatgggatttagtcgcgagcaggccacaaaa
gcacttagggccacgagtaatgttttggagagagccgtggactggatcttctcccacctg
gatgacctggagtccatggaggtgtccgagggcggacgctccgcaggggacagtgagggt
accagggagcctcccccagggcctcgtgtccgtgacggacaaggaaagtacgagctgttt
gccctcatcagtcacatgggcacaagcacaatgtgtggccattacgtctgccacatcaag
aaggaccaacaatgggttattttcaacgatcagaaagtgtgtgcctctgagaagccaccc
aaggatctgggctacctgtacttctacaggagagtggccgagtag
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