Clupea harengus (Atlantic herring): 105894925
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Entry
105894925 CDS
T09045
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105894925 (cdan1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105894925 (cdan1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
105894925
NCBI-ProteinID:
XP_031436332
UniProt:
A0A6P8GLM6
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Position
14:complement(5496567..5511949)
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AA seq
1330 aa
AA seq
DB search
MAALLESLLLGKLGTSKALVWLKYKQSSKDQPSCEPLLQVQRQEFVSFLLNFLRDQSSHT
LTHGPATPAKTPVSSRSAARSTRLSSDRGCRGGRSAGGGTGSRGNSRVQLFSPAPSVSPL
GGSQWEGSAAAASTSSRGELSGVSGVSSPSFSSVWSPAPRPLQADRRSAHRSSLGDFMTS
SPPEMHPHSPAMATGQQQQQQQHHRGSGRRRCGGSGGGGRPTGGRGFQQDDPSASWERGA
RRGRGGRAGEAVSPPTQVALNFNNLEDFPPVGASQHASPVLTKPSRRINPTPVHSERPNS
KPKSCFTSTPLSQPCSPPTIPEGALVVGSPLGLQEEREMLRKEKSKLQQQTCSPLKPTTE
PCTPTKPVRMDPTAAQDPTAPTPDPSKVTLTSELDLLAELYCTCISENLVPNVFLELFFV
LQLLTCRSPPALEGERDGLCGSAHDLLERGYFRDVHNCVYFAVKVVENQFELVCHLDKCT
VRLLAENERVGSFAPALRDRLALAQDTSTAKVSPSLPSFIHSVPFQPATDNRSNFNSDRA
FHIFKKQRDIFYELLRDWEDFHKEPGWEFETALGNRIRAMVSLQTAAGNHAHFARLFQKQ
LVQMCKEPGARGSFGEAPDADVLSILGADGLSRLKRLQERLIQPQGFMGPCPPPSFPGHQ
EFFRDFLQSASCCQLNQHLKDGMCQELLLLDEVSILGAPAGGSGEEEEGDGDMDQQDEKQ
RFSSVLLVARLLAKFLGFISFLPYHTSDPPSKEIQEAAIALRSKSSPVLDVCAVLRSCVR
RHRLVLTLPWLVEFLSMMDYTGPYLPCFRAALGSLLHLYRRMLLGRGAEVCYLNQLLLVA
VLGWLFQIPVFPEDVAFSEELDFGEETLDSSQGLDSLPLVDQQLLYTCCPFLGELRKLLA
AFVAGSTAKSGGLLRKITPTSAEPRDPPTTRSQQKLQMELEQAFFHNQPPSLKRTVEFVA
ERVSSNCVKHIKATLVSELVKGGERALREALAVESANVAKLNDTICTQLCYKGMQALETA
TRFCSEKGPEAVRVLLPEETSPAVLSTSESITTRLATEKACTWLSSNITALIKREWKSVF
DRVMKTLPSPPPPNPEAPTQTQTQIQTQTQAPTDPQRGGGGQTLGEKDCPPECTHQAPRA
SSVITDIKEVLSIAVGPRAEDEGCTIQQLQALLDRARETLQCRKFLSVVPEQMLVRCTIM
LACRLVSGELPLAPPMDSAGIRGVLQQLVHLWGSSPLPSLPLHLLFASPTLTAVLRLTDT
DNCQNFRVLVHLLLEAGLLGKEDVVSHWRSLLDLSWTMESIEKIQELSISSVPSASVSLP
SHRDLLQISQ
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgctgctgctggggaaactagggaccagtaaggccctagtt
tggcttaaatacaagcagagctcaaaagaccagccatcgtgcgagccattactgcaggta
cagaggcaggagtttgtgtctttcctactgaacttcttgagggaccagagcagccacact
ctcacccatggcccagccacgcctgccaagaccccggtcagctcccggtcggccgctcgc
tccacgcgcctctccagtgaccgcggctgcaggggcggccgctctgccgggggtggcacc
gggtcgcgcggcaacagtcgtgttcagctcttctccccggccccctctgtgtcaccgctg
ggggggagccaatgggagggctcggcagctgcagcttccacctctagtaggggcgagctc
agtggggtgagtggcgtcagcagcccttccttcagctcagtatggagcccggcgccccga
cctctgcaggcagaccgccgctccgctcaccgctccagcctgggcgacttcatgacgtca
tcaccgcccgagatgcacccacacagccccgccatggcaacagggcagcagcagcagcag
cagcagcatcaccgtggcagtgggcgtaggcgctgcgggggttctggtggaggggggagg
ccgacgggcggccgtggtttccagcaggacgacccgtctgcgtcctgggagaggggcgcc
aggaggggcagaggagggcgagccggtgaggcggtgtcaccccccacgcaggtggctctc
aacttcaacaacctggaggacttccctcctgtgggggcgtcccagcatgcatcgcctgtc
ctaaccaagccttctcgtcgcatcaaccctacgccggtgcactcggagcggcctaactcc
aaacccaagagctgtttcacctccacccctctcagccagccctgcagtccccccaccatc
ccagagggggcgctggttgtgggtagcccactgggcctgcaggaggagagggagatgctg
aggaaagagaaatctaaacttcagcagcagacttgctcgcctctgaagccgaccacggag
ccctgcacccctaccaaaccggtgcggatggaccccacggcggcacaggaccccacggcc
cccactcctgacccctctaaagtcactttgacctctgaactggacctgctcgctgagctc
tactgcacttgcatttcagagaacctggtgcccaacgtgtttctggagctgttcttcgtg
ctgcagctgctgacctgtcgcagccccccagccctggagggagagcgagacggtctgtgt
gggagtgctcacgacctgttggagagaggctacttcagagatgtccacaactgtgtgtat
ttcgccgttaaagtcgtggagaaccagtttgagttggtgtgtcacctggacaagtgcacc
gtgcgtctgctggctgagaatgagagggtgggctcgttcgctcccgcgctgagggaccgg
ctggctctggcacaggacaccagcacagccaaggtctccccctccctgccctccttcatc
cactccgtgccattccagcctgccacagacaaccgctccaacttcaacagcgacagagcc
ttccacatcttcaagaaacagagggatattttttatgagctgcttagagactgggaggac
ttccataaggagcctggctgggagtttgagacagctctgggcaacaggatcagggcgatg
gtcagtctgcagactgctgcagggaatcacgcccactttgctcggctgttccagaagcag
ctcgtccagatgtgtaaagagcccggggcgagaggctctttcggcgaggcccctgacgct
gatgtgctgagcattctgggagcggacggcctgagccggctgaagcgtctgcaggagcgt
ctgatccagccgcagggcttcatgggaccctgccctccgccctccttcccagggcaccag
gagttcttccgggacttcctgcaatcggccagctgttgccagctgaaccagcacctgaag
gacggcatgtgccaggagctgctgcttctggacgaggtgtccatcctcggggcgccagca
gggggcagcggtgaggaagaggagggagacggggacatggatcagcaggatgagaagcag
aggttctcctctgtgctcctcgtggctcgattgctggctaagttcctgggtttcatctcc
ttcctgccctaccacacctccgatcctccatccaaggagatccaggaagcagctattgca
ctgcgcagcaagagctctccggtgctggacgtctgcgcagtcctgcgcagctgtgtgcgc
agacacaggctggtgctgacgctgccctggctggtggagttcctctccatgatggactac
actggaccctacctgccctgcttcagagctgcactgggctcactgctgcacctctatagg
cgaatgctgctgggcagaggagctgaggtgtgttacctgaatcagctgctgctggtggcg
gtcctgggctggctcttccagatccctgtgtttccagaggacgtcgcgttcagtgaggaa
ctggacttcggtgaagagaccttggacagttcgcagggcctggactcgctccccctggtg
gaccagcagctgctctacacctgctgccctttcttgggtgagctccgtaaactgctagcg
gcctttgtggcggggagcacagccaagagcgggggcctcctacgcaagatcacacccacc
tctgctgagcccagagacccccccacaacacgctcccagcagaaactacagatggagttg
gaacaggcattcttccacaaccagcccccgtctctcaaacggacggtggagtttgtggcc
gagcgagtcagctccaactgcgtcaaacacatcaaggcgaccctggtgtcggagctggtg
aagggcggcgagcgggccttgagggaggcgctggccgtggaaagtgccaacgtggccaag
cttaatgacaccatctgcacccagctgtgttataagggcatgcaggcactggagacggcc
accaggttctgcagtgagaagggtccagaggctgttagagtcctgttgcctgaggagacc
tccccagcagttctcagcacttccgagagcatcaccacccggctggccacggagaaggcc
tgcacctggctctcatccaacatcacagcgctgatcaagagggagtggaagagtgtgttt
gaccgcgtcatgaagacccttcccagccctccgcccccaaacccagaggcgccgacccag
acacagacccagatccagacccagacccaggcccccacagacccccagagaggtggtgga
ggacaaaccttgggagagaaagactgccccccagagtgcactcaccaagcgccccgagcc
tcctccgtcatcacggacataaaggaagtgctgagcattgcagtaggacctagagctgag
gatgagggctgcaccatccaacagctgcaggctctgctggacagagcaagagagactcta
cagtgccggaagttcttgtctgtggtgccggagcagatgctggtacgatgcacaatcatg
ttggcctgcaggctggtgtcaggagagctccctctggccccccccatggacagcgcaggc
atcagaggcgtcctgcagcagctggtgcacctgtgggggagcagccccctcccctcgtta
ccgctccacctgctcttcgcctcccccaccctcaccgccgtgctcagactcacagacaca
gacaattgccaaaactttagggtcttggtccatctgcttttggaggcaggacttctagga
aaagaagatgtagtgtcacattggagaagcttactggacctgtcctggaccatggagtcc
attgagaagatccaggagttgtccatctcctccgtcccctctgcctctgtctcactgcca
agccacagagacctcctgcagatctcccagtga
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