Clupea harengus (Atlantic herring): 105894930
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Entry
105894930 CDS
T09045
Name
(RefSeq) synaptosomal-associated protein 23 isoform X2
KO
K08508
synaptosomal-associated protein 23
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105894930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105894930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105894930
Membrane trafficking [BR:
char04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
105894930
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105894930
Exosomal proteins of other body fluids (saliva and urine)
105894930
Exosomal proteins of colorectal cancer cells
105894930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
Sec20
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
105894930
NCBI-ProteinID:
XP_012676938
Ensembl:
ENSCHAG00000007873
UniProt:
A0A6P3VPQ6
LinkDB
All DBs
Position
14:complement(5390577..5403291)
Genome browser
AA seq
213 aa
AA seq
DB search
MADMTVEEMTIKANQVTDESLESTRRMLQLAEESKETGVKTMDMLDQQGEQLRRVDQGMD
KINEDMRQAEKNLTDLNKCCGMCVCPCDQVKSIEHDSKYKRTWGVGRDANGVDPGEGGVV
TNQPPGQRNGQVGTTVVVASGGYITRVTDDAREDEMEENLTAVGGILGNLKNMAIDMGNE
IEKQNKTIDNITDKAEMNKVRIDEANHRANKLL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgaccgtggaggagatgaccatcaaggccaaccaagtgaccgatgagtcg
ctggagagcaccagacgcatgctgcagctggcggaggagagcaaagagaccggtgtcaag
accatggacatgctggaccagcaaggggaacaattgagacgggtggatcaggggatggac
aagatcaacgaggacatgcggcaggctgagaagaatctgaccgacctcaacaagtgctgt
gggatgtgtgtgtgtccctgcgaccaggtgaagtctattgagcatgactcgaagtacaag
cgcacgtggggcgttggccgcgacgccaatggtgtggaccctggcgagggaggcgtggtc
accaaccagccccccggccagcgcaacgggcaggtgggcacgacggtggtcgtggcatca
ggaggctacatcacaagggtaacagatgatgctcgagaggatgagatggaggagaacctg
actgcggtgggaggcatcctggggaacctgaagaacatggccatcgacatgggcaacgag
atcgagaagcagaacaaaaccatcgacaacatcaccgacaaggctgaaatgaacaaagtt
cgcattgatgaggccaaccacagagccaacaagctcctgtag
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integrated database retrieval system
