Clupea harengus (Atlantic herring): 105894947
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Entry
105894947 CDS
T09045
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105894947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105894947
Ion channels [BR:
char04040
]
Ligand-gated channels
Serotonin (5-HT3)
105894947
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Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
105894947
NCBI-ProteinID:
XP_012676959
UniProt:
A0A6P3VNE8
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Position
1:27893065..27895692
Genome browser
AA seq
352 aa
AA seq
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MHFSSQLTLKMRWNDPDFVWNKTVHNFTVLVLPASKIWTPDLTVDNAVAVKTKPTFSDVV
VEYNGNVEYTINMYITVKCNINLFNYPFITDFCPVALNGWTNKDGCGMHLNFRDRNLNWA
NGSAGEWVTQGVILTGSGFRNYLNVELSISPFNPVVGLLLPSLLIILADIMSCMLPLGGG
ERNSFKVTLVLSFTMFLNLLTEQIPDNGDCSPLIRYHFLICLLLLVLSMLSSLALSGMLK
GCGFKFCRGGKVTEDNHEYPQRKKGDGEATGGPQDNDHEMKDDSLHRVMGFLEGRQWQER
EESKAKAYAEKLDRIGFLVYISVCVLYIIGVVATATGEFCDSNNLDFWRDDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctctagccaacttactttgaaaatgagatggaacgatcctgattttgtgtgg
aacaagacagtccacaactttacagttctggttcttccagccagtaagatctggacccct
gacctcaccgtggacaatgcagtggccgtaaaaactaagcccaccttcagtgacgtggtg
gtggagtacaatggaaatgttgaatataccatcaatatgtacatcacagtaaaatgcaac
atcaatctcttcaattatcccttcatcactgacttctgccctgtggccctaaacggctgg
acaaacaaggacggatgtggcatgcatctaaattttcgtgacagaaacctgaactgggct
aatggaagcgctggagagtgggttacccagggtgtgattcttactggttccggcttccgc
aactacctcaatgtagagctgagcatcagcccgtttaaccctgtggtgggcctgctcttg
cccagcttgctcatcatcctggctgacatcatgagctgcatgctgccactcgggggcggc
gagcggaacagctttaaggtcacgctggtgctcagcttcaccatgttcctcaacctgcta
acggagcaaatccctgacaatggcgactgcagtcccttgatcaggtaccatttcctcatc
tgcctcctccttctggtactgagcatgctcagttctctggccctctctggcatgttgaag
ggctgcggcttcaaattctgccgaggtggaaaggttactgaagacaaccacgagtatccc
cagagaaagaagggtgatggagaagcaactggtgggccacaggacaacgaccatgagatg
aaggatgactctctccacagagtgatgggattcctggagggcaggcagtggcaggagcgg
gaggagagcaaggcaaaggcctatgcggagaagttggacagaataggcttcctggtttac
atttctgtctgtgtgctgtacattatcggcgtagtggcgacagctacaggagagttctgc
gattcaaacaaccttgacttctggagagatgatgactaa
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