Clupea harengus (Atlantic herring): 105895026
Help
Entry
105895026 CDS
T09045
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105895026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105895026
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
105895026
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105895026
Prokaryotic type
105895026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
105895026
NCBI-ProteinID:
XP_012677046
Ensembl:
ENSCHAG00000000331
UniProt:
A0A6P3VNM6
LinkDB
All DBs
Position
10:complement(23872298..23881931)
Genome browser
AA seq
527 aa
AA seq
DB search
MFHPIKWRECILGLRSAMQKGKKVAVENTETVKRIKRKVTHVKEEPTEAESSVYHFFQCP
EDIGSFRSQLLRWYEQTKRELPWRTLAMTEQDIDVRTYAVWVSEIMLQQTQVATVIDYYN
RWMKKWPTVEKLSEATLEEVNQIWAGLGYYSRGRRLHEGSQKVVSELGGEMPRTTEKLLK
QLPGVGRYTAGAIGSIALGQVTGVVDGNVIRVLCRVRAIGADSTSPAVTEALWKMADTLV
DPQRPGDFNQAMMELGARVCTPKSPLCNTCPVQSHCHAFKKVLVKQEKESRRLQSKLDPA
VNGSVPDIENCGTTGTCKLCSSEPWDSQLGVQNYPRKPAKKAARVERTLVCVLERDGAGD
EREYLLTQRPSKGLLAGMWELPGVLEEEGGSEMKRKKALCTEMGKILGVPLDKEPLEFVG
EVVHIFSHIHQTYVVYSMVFPAHKNGKEKPTIRWLTRSALQEAAVSTGVKKIMKLYDSMK
IPKGGNAKDKKRKSSESKDGKKPKKVKDSGGAKQLSLTKFFSPSKTN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccccatcaaatggcgggaatgcatcctggggctaagatctgctatgcagaag
ggcaaaaaagtggcagtggagaacacagagaccgtgaagagaattaagagaaaggtgact
catgttaaagaagagccaacggaagcagaatcctctgtttaccactttttccagtgtcca
gaggatattgggtctttcaggtcgcagctcctgcggtggtatgaacaaacgaagagggaa
ttgccatggcggacattggcgatgacagaacaggacatcgatgtcagaacatatgcagtt
tgggtctctgaaatcatgcttcagcaaactcaagtggccactgtcatagactactataac
agatggatgaagaagtggcccactgtggagaaactctctgaagccacactggaggaggtg
aatcagatctgggcagggcttgggtactactcaagagggagaaggctgcatgagggatcc
caaaaggtggtgtcagagctggggggagagatgcccaggaccacagagaagcttctgaag
cagcttccaggggtggggcgctacactgcgggagccataggctccattgcacttggccag
gtgacgggtgtggtggatggaaatgtgattcgtgtcctgtgtcgtgttcgggccattggg
gcagacagcacaagtccagcagtcactgaggcactatggaagatggctgatacccttgtt
gatcctcagagacctggagactttaaccaagccatgatggagctgggggcacgagtgtgc
actcctaaaagcccactatgtaacacgtgtcctgtacagtcacactgccatgccttcaag
aaggtccttgtcaagcaagagaaggaatccaggagactccagagtaaattggatccagcg
gtcaatggctctgttccagatattgaaaattgtgggaccacaggtacctgcaagctctgc
tcgtctgagccttgggacagccagctgggtgtgcagaactacccaaggaagcctgccaag
aaagctgcccgcgtggagcggaccctggtctgtgtgctggagcgggatggggcaggagat
gagagagagtaccttctcacacagaggcctagtaaaggattgttggctggaatgtgggaa
ttgccaggcgtgctggaggaggagggaggttcagaaatgaaacggaaaaaagctctgtgc
acagagatggggaagattctgggagtccctctagacaaagagcctctggagtttgttggc
gaggttgttcatattttttcacacatccaccaaacatatgttgtgtatagtatggtgttt
ccggctcataaaaacggaaaggagaagccaacaatccgctggctcaccagatctgccctg
caagaagctgcagtttcaacaggagtgaaaaagataatgaagctgtatgattccatgaaa
attcctaaaggaggaaatgccaaggacaaaaagagaaaaagctctgaatcaaaggatggc
aagaaacccaaaaaagtgaaggacagtggaggagccaagcagctttccctcaccaagttc
ttctctccctcaaaaacaaactaa
DBGET
integrated database retrieval system
