Clupea harengus (Atlantic herring): 105895048
Help
Entry
105895048 CDS
T09045
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105895048 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895048 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
char04131
]
105895048 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
char03029
]
105895048 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105895048 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
105895048 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
105895048 (si:dkey-110c1.10)
Membrane trafficking [BR:
char04131
]
Others
Actin-binding proteins
Myosins
105895048 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
105895048 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
105895048 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
NPHP3_N
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
105895048
NCBI-ProteinID:
XP_031430113
UniProt:
A0A6P8FPM4
LinkDB
All DBs
Position
10:22557919..22577706
Genome browser
AA seq
1592 aa
AA seq
DB search
MYEQSYTPAPKNSKSPLSVPCITCNETWPGLFSGIVLVAINPYEQLPIYGEEVIDAYSGQ
DMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYFAVVGGASQQT
SVEERVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRTYLLEKSRVV
FQAPMERNYHIFYQLCASKDLPEMKALKLEAAEYFRYTNQGEETQIPGTDDIVELERTRN
AFTILGVQSDQQMELFRILAAVLHLGNINIQASGRGGDRSYIDTDDRSLRLFAKLLGVEG
AQMAHWLCHRRLAVGGEMLVKPMPGQQAVGARDALAKHIYGQLFSWTVQRLNAGLRAQRE
RPKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYVREELPWSRI
EFSDNQPCIDLIEGSLGLLDLLDEECRMPKGSDESWARKLYDQHTTRSAHFRKPRMSNTA
FIILHFADTVQYECDGFLGKNRDTVFEEPINIMRASQSELVAELFQQDSPGGAVALSVPN
GSLRSGKRTHREHKLTVGFQFRQSLQLLMDTLNSTTPHYVRCIKPNDVKQPFVFDPKRAV
QQLRACGVLETIRISAAGYPSRWTYEEFISRYRVLLWGSLSPGEVRGSCQRALSQLIPDP
EQYCCGKTKVFFRAGQVAVLEKLRAERLHAAGVIIQSWVRGWLGRRRFLRLRWATLTLQR
YARGGLARRLAQTLRYTRAALLIQKTYRMVMVRQLYLMIREATITIQAYTRGTLVRKNYR
KLLEERSAVCLQAAVRGWLQRRAFGRVRAAVVLLQCCVRRRLARRELQKLRAEARSVEKL
GELNKGMEVKLMMLQLRADHQARESGSLRETLQAEREAHSSEVEQLRSALHLLETTLQEE
PKRSRKISEREEEERRKMEERSANEVLQLTQELEALKTERDGLLKDKEDLSAHVLEQEKE
QADCMQKAVCETVESVQAELEEERRRYQGLLREFTRLEQRYDNLRDMSLLTERPREHRRT
DSTQSVVSLLEPLSPGTPSFTGTPSFPSPEEVRRVSVTSPAFEKRPFSPDGPLNVLMEEV
GVAKDAADKMQGEDLRHAYDAVRVANKFLENQLLTQHWQWEEELAALRLQVEGSERVRVP
SETATSADLQELLEQVEVRELECCRLRKELTDLRGVASLRRILALTGPAASSSALQAPVT
PQRRGGSAAGLLECRKKDEAKLIKNLITDVRVDSALSLPLGLAAQVLFLCVQQADCSGDQ
TRARSLCAAAVAGIKAALKKHCTDLDMTALWLKNTCLLADLLIQHSSKQDPGPCEDLLPL
AFDVSETSRALSDLRIKAYQQLLAITESRLQSIIVPAMLESETIPGLSGSASKLASSRKR
AGSDPRAPGSEAPTMVQVLRELGALHAALTHQELPLALQEQALRQLSHLLTASALNSLLL
RKDMCCWNRGLQIRYNVSLLEEWLRSRGLQTGGAVATLEPLIQAAQLLQMSKKSESDAAA
LVQTCKVLSTQQIVKILTLYSPQSDAEERVTLNFIRIVQGLLRERSDGQPPQLLLDVRRV
FPVTFPHQPPPPQRAEQLAIPESLKISFLRKA
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagcagagttacacccccgccccaaagaacagcaaaagccctctatctgtgccc
tgcatcacttgcaatgaaacctggcctggcttattttcaggaattgtattggtggccata
aacccatatgaacagttacccatatacggagaggaggtgatagacgcctatagtgggcag
gacatggcagacatggagccccatatattctctgtggctgaggaggcctaccgcaccatg
actagggaggaaaagaatcagtccattatcataagtggcgaatctggcgcggggaagacc
gtctctgccaagttcaccatgcgctacttcgctgtggtggggggcgcctctcaacagacc
agcgtggaggagcgagtcctggcgtccaaccccattatggaggctatcggcaatgccaaa
acaacacggaatgacaacagcagccggtttgggaagtacatcgagatcggatttggacgc
aagggtgacatcatcggagctaacatgaggacgtatttattggagaaatctcgagttgtt
ttccaggctcctatggagaggaactatcacatcttctaccagctgtgtgcctccaaagac
ctgcctgagatgaaagcactcaaactggaggcagctgagtacttcagatataccaaccaa
ggggaagagacccagattcccggcacagatgatattgttgaactagagcgcacccgtaat
gccttcaccatactgggtgtgcagtcagaccagcaaatggaattgttccggatactagca
gccgtgttgcacctcggaaacatcaacattcaggccagtggcagaggaggagaccggagc
tacattgatacggacgaccgctcgctgaggctgtttgccaagctgctgggagtggaggga
gcgcagatggcccactggctgtgccaccggcggctggcggtgggcggcgagatgctggtg
aagcctatgccgggccagcaggccgtgggggcgcgggacgctctggccaagcacatctac
ggccagctcttcagctggaccgtgcagaggctcaacgccggcctgcgcgcacagagggag
cggcccaagtccttcattggagtcctggacatctacggatttgaaacatttgacaggaac
agctttgaacagttctgcattaattacgccaatgagaaactgcagcagcagtttaacaga
catgtattccacctggagcaggaggagtatgtgagagaggagctgccctggagccgcatc
gagttcagcgacaaccagccctgcatcgacctgatcgagggctcgctgggcctgctggac
ctgctggatgaagagtgcagaatgcctaagggctcagacgaaagctgggcgaggaagctg
tatgaccagcataccacccgaagtgcccacttccgaaagccccgcatgtcaaacacggcc
ttcatcattctgcactttgctgacacggttcagtatgaatgtgatgggtttttaggcaag
aaccgtgacacagtatttgaagagcccatcaatatcatgagagcaagtcagtcagagctc
gttgctgagttgttccaacaggactcaccagggggcgctgtggcgctgtcggtgcccaat
gggagcctgcgctctggcaagagaactcacagggaacacaagctgacagtgggatttcag
ttccgtcagtctctccagcttctgatggacactctgaacagcaccacccctcattatgtc
cgctgtataaaacccaacgacgtcaaacagccatttgtctttgaccccaagagggcggtc
caacagctgcgagcgtgtggagttctggagaccatacggatcagcgccgcaggatacccg
tcaagatggacctatgaggagtttatcagtcggtaccgggtgctgctatggggttctctg
agtcccggggaggtccgaggcagctgtcagcgggccctgtcacagctcatcccagacccc
gagcagtactgctgtggcaagaccaaggtgttcttccgagcgggccaggtggcggtgctg
gagaagctgcgggccgagaggctgcacgccgccggggtgatcatccagagctgggtgcgg
ggctggctgggacgccgccgcttcctacgcctccgctgggccacgctcaccctgcagaga
tacgcccgcggaggcctggccagacggctggctcaaactctccgttacacgcgagcggca
ctgctcattcagaagacgtaccgtatggtgatggtgcggcagctttatctgatgatacga
gaggctaccatcaccatccaggcttacaccaggggcacgctggtgcgcaagaactacaga
aagctgctcgaggagcgttcggcggtgtgtctgcaggctgccgtgcgtggctggttgcag
cgccgggcctttgggcgcgttcgggccgccgtggtgctgctgcagtgttgcgtgcgcagg
cgcctggcccgcagggagctgcagaagctgcgggcggaggcacgctcggtggagaagttg
ggcgagctcaacaagggcatggaggtcaagctgatgatgctgcagctccgcgccgaccac
caggccagggagagtggcagcctgagggagactctgcaggcggagcgtgaggcccactcc
tctgaggtggagcagctccgctccgccctgcacctcctggagaccacgctgcaggaggag
cccaagaggagccgcaagatctccgagagagaggaggaggagaggaggaagatggaggag
agatcagccaacgaggtccttcaactcacacaggagctagaagctcttaagacggagaga
gacggtctgctgaaggacaaagaggatctctccgcacatgtactagagcaggagaaagag
caggcagactgcatgcagaaggcagtgtgtgagacagtggagagcgttcaggcggagctg
gaggaggagcgtcggcgctaccagggcctgctgagagagttcacccgtctggagcagaga
tacgacaacctgagagacatgagcctgctcacggagcgcccgcgggaacaccgacggacc
gactcgactcagagcgtggtgtcactcctggagcccctctcccccgggaccccctccttc
accggcaccccctccttcccgtcgcccgaggaggtgcgcagggtgagcgtcacctcgccc
gctttcgaaaagagacctttcagccccgacggccccctgaacgtgttgatggaggaggtg
ggggtggcgaaagacgctgctgataaaatgcaaggcgaagatctcaggcatgcctatgat
gctgtacgtgtggccaacaaattcctggagaaccagctgttgacccagcactggcagtgg
gaggaggagctggctgccctgcgactgcaggtcgaggggtcagagagggtccgagtcccg
tctgagaccgctaccagtgcagacctgcaggagctcttggagcaggtggaggttagagag
ctggagtgctgtcgtctgaggaaggagctgacagatctgaggggtgtggcgtctctgagg
aggattcttgctctcacaggcccggctgcgagctcttcagctctccaggccccagtcacc
cctcagaggagagggggaagcgctgcaggcctgctggagtgcaggaagaaggacgaggcc
aagctcatcaagaacctcatcacagacgtgcgtgtggacagcgccctgtccctgccgctg
ggcctggctgcgcaggtgctgttcctgtgtgtgcagcaggccgactgcagcggggaccag
acgcgggcacgctccctctgtgccgccgctgtcgccggcatcaaggctgcgctcaagaag
cattgtactgatctggatatgacagcactgtggctgaaaaatacctgcttactcgcagac
cttcttatacagcattcatcaaagcaggatcccggcccctgtgaggacctcctgcctctg
gcgtttgatgtgagcgagacgagtcgagcgctgagcgacctgcgcatcaaggcgtaccag
cagctgctggccatcaccgagagccggcttcagtccattatcgtcccggccatgctggag
agtgagaccatcccggggctgtccggatcagccagtaagctggccagctcccgtaagcgg
gccggttctgacccgcgggctccgggctcggaggcccccacgatggtgcaggtgctgcgc
gagctgggcgccctgcacgccgccctcacccaccaggagctgcccctggcactgcaggaa
caggccctccgccagctcagccatctgctgaccgccagcgccctcaacagcctgctgctg
cgcaaggacatgtgctgctggaaccgcggcctgcagatcaggtacaacgtgagcttgctg
gaggagtggctgcggagccgtgggctgcagacagggggcgccgtggccacactggagcca
ctgatccaggctgcccagctcttgcaaatgagcaagaagtcagagtccgacgcagcggca
ctggtccagacttgcaaagtgctatcgactcaacagattgtcaagattttaaccctctac
agcccacaaagtgatgcagaggagagggtcacacttaatttcattcgtattgtacagggt
ctgctgagggagcgttctgacggccagcccccgcagctgctgctggatgtgcgcagggtc
ttccctgtcaccttcccccaccagccgcccccgccccagcgcgcagagcagctggccatc
cccgagtccctcaagatctccttcctccgcaaggcctga
DBGET
integrated database retrieval system