Clupea harengus (Atlantic herring): 105895055
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Entry
105895055 CDS
T09045
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105895055
Membrane trafficking [BR:
char04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
105895055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
FNIP
LRR_4
Motif
Other DBs
NCBI-GeneID:
105895055
NCBI-ProteinID:
XP_042564854
UniProt:
A0A8M1KT87
LinkDB
All DBs
Position
10:22377486..22411176
Genome browser
AA seq
1224 aa
AA seq
DB search
MGEEKTVRFITERGRQGHRGGARERGRDMASKETTSSCFVSVSRDLTESLRKLIDKSSIK
FIRGIKLDTKNGKSEDRILVLTTWRLYLMAVKIPSKVEMTFNFLEIRAINTHPELQVIIE
TDKSTYSLRLQSRDHLDHVINHVNYALSRIFNNSIFAPSICQSDSDLSDGSRKYSPSSDT
SVETQRACGGFSETYAALCDYNGISCKEEVQWDVDTIYHSQDNREFNLLDFSHLESRDLA
VIVASMAYNTWFTKLYCKDLRIGSEVTEQVLHTFSKSSSLEDITLENVGLKSDFPQKLSV
ALSENPASVIHSLNLAHNTLDNQGVCNLIQQVCRLSKGLRLLNLSKTSLSSKGVISLSQA
LCSSDDYSNSLLHLDLSKNPGVLSGEDASNLYLFLSQPNCLVHLDLSSTDCSVDSLFGAL
LRGCCADLSYLNLSKNSFSHRKVKDSLPYFRQFFSSAFSLTHISLSSMKLPPDVLRALLM
GLTSNPHINDMHLDISGCELRSTGAAVLQELLPRVSSIATLDISDNGLDGDLLTLLPSLS
RHPSLKHLHLGKNFNIKHRVLDDTLQKLVQMIQEEECALQSLSLADSRLRSRGTVLVNAL
GSNTCLRKVDLSGNNMEDIGAKMLSKALQINTTLRSVTWDRNNTTATGFMDVARALEHNF
TLQYMPLPLSDITQAYRSAPEKMEQALTKIQRALLRNNQTQRFSQRQALRLHQGIVTSTA
EQVMERLCARVQQQVCALKGIAEAEELQAAKQVLKEARNSRALYPSLCELAHVLSVDGPV
RQRLDSLAGELAKAADKELQVIVDSMVSLCRELCPLSSAAAERLSPPLSSVSERVSIPRS
AIRTALMERAAQDIHRALEEVKLSVVSYLTNSIVDQILQELYSTHKALARQVSQLKRWEG
MCDGGTGRRSHRHRDSLEITDEELGTSIDTIAIKKRSSRTRRIRPVSTRLSLNDDSSSSP
PPSAPPLSSPLSRSASWEGLSELPTLGTPLQHVTRVRPKPPRKHRGGHTLSDTQLPEPCS
NFQNDLEWVQANLYKHCNENGAVTPLDDGLPDFYTKRVLPDSQLSSLHKAHSLRRKKRRN
MLSIFGFRRNRNSTLSNKEPDSGGGSCSEECRTVATAPTGTAQENVYTLLQPPRLPGRAG
SPGEGSDGTVEEERVEEYTGVMEVRSIQGLPLPSIGENKQLYSTRQVQFICERTIIVLAK
VHLSSEVSISLCLFSAVAGSSAVY
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggagaaaaccgtgcggttcatcactgagagagggagacagggacacaggggt
ggtgcccgagagagaggaagagacatggcttccaaagagaccacatcctcctgttttgtc
agcgtttccagggacctcacagaaagcctcaggaagctcatcgacaaatcctcaatcaag
ttcattcgtggcatcaagcttgatacaaaaaatggcaaatcagaagacaggatattggtt
ctcacaacatggaggctctatctaatggccgtgaagataccttcaaaggtggagatgact
ttcaacttcctggagatacgagccataaacacacacccggagctgcaggtcatcatagaa
acagacaagtccacctactctctccggctccagtcaagagaccaccttgatcatgtgatt
aatcatgtcaactacgccttgtcacgaatattcaacaactctatttttgcaccatccatc
tgtcaatcagacagtgacctatcagatggaagcaggaagtactctcctagttcagacacg
tcagtggagacacagagagcgtgtggaggcttctcggagacatatgctgccctgtgtgat
tacaatggcatcagctgtaaagaggaagtgcagtgggatgtggataccatttaccactct
caagacaacagggagttcaacctgctggacttcagtcatctagaaagcagggacttggca
gtgattgtggcctctatggcgtacaacacatggttcactaagctctactgcaaggacctg
cggattggttcagaggtcacggagcaagttctgcacacgttcagtaaatcttccagcctg
gaagacattacactggagaacgttgggctgaaatccgatttcccccagaagttgtccgtc
gccctttcagagaatccggcctctgtaatccactccctcaatttggctcataacaccctt
gacaatcaaggcgtctgcaatctcattcagcaggtgtgtcgcctgagcaaagggctgcgt
ctcctcaacctgtccaagacgtccctctcctccaaaggtgtgatctccctctctcaggcc
ctgtgttccagcgacgactactccaactccctcctgcacctggatctcagcaagaacccc
ggggtcttgtcaggagaggacgcctcgaacctgtacctgtttctctcccagcctaactgc
ctggtccatctggacctgtcgagcacagactgttcagtggactcgcttttcggtgcgttg
ctcaggggctgctgtgctgacctctcctacttgaatctctccaaaaactccttctctcac
aggaaagtaaaggactctctcccgtatttccgccagttcttcagctcagccttctcactc
actcacatcagtctatcctccatgaagctgcctcctgacgttctgagggcgctgctcatg
ggtctgacatcaaaccctcacattaatgacatgcatctggatatcagtggctgtgagctc
aggtcgactggagctgcggtgctccaggagctcctccccagggtttcctccatcgctacg
ttggacatctcagacaacggtctggatggagacttgctcactcttctgcccagtctatcc
agacacccctccctgaaacacctacatctggggaaaaatttcaacattaagcacagagtg
ctggatgacacgctacagaagctggtgcagatgattcaggaagaggagtgtgccctgcag
tcgctgtccctggcggactccaggctgcgctcgcgaggcacggtgctggtcaacgctctg
ggcagcaacacctgcctccgcaaggtggacctgagcggtaacaacatggaggacatcggg
gccaagatgctgagcaaagccctgcagattaacaccactctcaggagtgtaacgtgggac
cggaacaacaccaccgccacaggattcatggacgtggcccgtgcactggagcataacttc
accttgcagtatatgcccctccctctcagcgacatcacacaggcctaccgaagtgcacct
gagaagatggagcaggcactcaccaagatccagagggccctcctgaggaacaaccaaact
cagcgcttctcccagagacaggctctgcgtctgcaccagggcatcgtcaccagcacagct
gaacaggtgatggagcgtctgtgtgcacgtgtccagcagcaagtgtgtgcgctgaaaggc
atcgcagaggcggaggagctgcaggctgccaaacaggtgctgaaggaggccaggaactca
cgggcgctgtacccgtccctgtgtgagctggcccatgtgctgtccgtggatggaccggtc
agacagaggctggactcactggctggagagctggccaaagctgccgacaaggagctccag
gtgatcgtggactccatggtgtctctctgtcgggagctgtgtcccctctcctcggccgcg
gcggagcgcctgagtcccccgctctcctccgtctccgagcgcgtctccatccctcgctcg
gccatccgcaccgcgctgatggagcgggcggcgcaagacatccacagagcgctcgaggag
gtgaaactgtcggtggtgtcctatctaaccaactccattgtggatcagatactgcaggag
ctctactccacacataaagccctggctcggcaggtgtcccagctgaagcgctgggagggc
atgtgtgatggagggacgggccggagatcacaccgccacagagactcactggagatcact
gatgaagagctcggcacaagtatagacaccattgccattaagaagcggagctccagaacg
cggcgcattcgacccgtgtccaccaggctgagtctgaatgacgactccagttcttcccct
cccccctccgcccctcctctctcctcgcccctctcccgctcggcctcctgggaaggcctg
tccgagctgcccacactgggcacacccctgcagcacgtgacacgggtcaggcccaaaccc
ccacgcaagcaccgcggtggacacacactctctgacacacaactgccagagccctgctcc
aatttccaaaatgatttggaatgggtccaagctaatctttacaaacactgcaatgaaaac
ggggcagtcacgccgctggatgatgggctgcctgatttttacaccaagagagttctgcct
gacagtcagctctcctccctccacaaagcccactctctgcggagaaagaagaggcgcaac
atgctctccatcttcggtttccgtaggaaccgcaactcgactctctctaacaaagagccg
gactcaggtggtgggtcctgcagtgaagagtgccgaacagttgccacggcacccacagga
accgcccaggaaaacgtttacactctcctccagccccctagattgccaggccgggccggc
tccccgggggaagggtccgatggaactgtggaagaggagagagtggaggagtacaccggt
gtcatggaagtgaggtctatacagggcctgccacttcccagcataggagagaacaagcaa
ctttattctaccagacaggtacagtttatatgcgagcgtactattattgtacttgcaaag
gtgcacctgtcatccgaggtgtcaatcagtctttgcctattttctgccgttgccggttca
tctgcagtttactga
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