Clupea harengus (Atlantic herring): 105895063
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Entry
105895063 CDS
T09045
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105895063 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895063 (fip1l1a)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105895063 (fip1l1a)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105895063
NCBI-ProteinID:
XP_031430108
UniProt:
A0A6P8FPL8
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Position
10:21744955..21760031
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AA seq
317 aa
AA seq
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MSTEETEKTTDGSGAGDEEEWLYGDEDEEQKDSSLPGGRENDGNDVADQSEEESESDSDD
DDVCVTIGDIKTGGTESTSSGALAVNFNTKTSGWTLGLGTTRKGVDLNAQGSVNGTPLLE
VDVESFDEKPWKKPGADLTDYFNYGFNEESWKIYCDKQRRVRMSLEVMSLGSSKALGRTS
YHSDRSLSKSDSFYDSASSSSRKLSNSINVIGGQSGTISRVEGRRRHNADGSQIQVISEP
SSDGETTPTKMPFFPPNIPPPPLSRLCRALTRTGNEIQMDPLEEGEPHWSRGAGEEGRGG
GGGLDGRPNQSQAPSSQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaggagacggaaaaaacaactgatggtagtggtgcgggagacgaagaagag
tggctatatggagacgaagatgaagaacaaaaggacagctcattgcctgggggacgggag
aatgatgggaatgatgtggccgatcagagcgaagaagaaagcgagagtgatagtgacgat
gatgatgtttgtgtcacaattggtgacatcaagacgggggggactgaaagcacgtccagt
ggagccctagctgtgaatttcaacacaaagacctcaggatggacacttggcttaggaacc
acgaggaaaggtgtggatctgaacgctcaggggagtgtgaatggaactcctctgctggag
gtagacgtggagtcctttgatgaaaagccatggaagaaaccaggtgcggacctcactgat
tacttcaactatggctttaacgaggagtcatggaagatctactgtgacaaacagaggagg
gttcgcatgagtctggaggtcatgagtttaggatcatccaaagctctggggcgaacaagt
taccatagtgaccgctccctctccaagtcagacagcttctatgattcggcttccagctca
tcaaggaaattgagcaactccatcaatgtcatcggaggacagtcaggaaccatcagcaga
gtagaagggcgcagaagacacaatgcggatggaagtcaaatccaggtgatctcagagccg
tcctctgatggtgagaccacgcccaccaagatgcctttcttccctccgaacatcccccct
ccccctctatcccgcctctgccgcgcgctgactcggacaggaaatgagatccagatggat
cctctggaggaaggtgaaccacactggagcaggggagcaggggaggaggggaggggaggg
ggagggggcctggatggaaggcctaaccaaagccaggcgccctcctcacaataa
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