Clupea harengus (Atlantic herring): 105895147
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Entry
105895147 CDS
T09045
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105895147 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105895147 (rad54l)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105895147 (rad54l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
105895147
NCBI-ProteinID:
XP_031430313
Ensembl:
ENSCHAG00000023002
UniProt:
A0A6P8FQ75
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Position
10:23496594..23505628
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AA seq
742 aa
AA seq
DB search
MRRSLAPSQVAKKKRCGGDSSSDEDWDPVKTSKRRKGDADCRENLISPYRKPLTQLTNPP
QCVDSSQHEAFIRSILSKPFKIPIANYTGALGIRALGLKRAGVRKALHDPFEVDALVLYE
PPALSAHDMIKADKDKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIPDSYGCIMA
DEMGLGKTLQCIALMWTLLRQSPDCKPEIEKAIVVSPSSLVRNWYNEVGKWLGGRMQPLA
IDGGTKEEIDRKLAGFMAQHGLRVPSPILIISYETFRLHTGVLHKGKVGLVICDEGHRLK
NSDNQTYQALNAMNAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPIL
KGRDADASDKDRTAGEDKLKELISIVSGCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSE
LYKRFLRQAKPVESLQGGKISVSSLSSITSLKKLCNHPSLIYDKCVEGEEGFEGALDLFP
SGYSTKAVEPQLSGKMLVLDYILAMTKSTTSDKVVLVSNYTQTLDMFEKLCRTRRYLYVR
LDGTMSIKKRAKIVEKFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQ
AMARVWRDGQKKTCFIYRLLSSGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELR
ELFSLNEDTTSDTHDKFRCKRCVNGRQVRPPPEDADCTSDLSLWQHCSDKRGLRDPMLTA
AWGATVSFVFHQRSHEDQRGVV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcttagcaccaagtcaagttgccaaaaaaaaaagatgtgggggtgattcc
tcctccgacgaggattgggatcctgtaaagacaagtaagcgaagaaagggagatgcggac
tgccgagagaaccttatctccccttacagaaaacctctcacacagttaaccaatccaccg
caatgtgtggacagcagtcagcacgaggcctttattcgcagcatcctttcaaagccattc
aaaattcctattgccaactacacaggcgcattgggaatacgagctctgggcctgaagcgt
gcaggggtccggaaggctcttcatgacccgtttgaggttgatgcactggttctttatgag
ccacctgctctgagtgcccatgacatgatcaaagctgacaaagacaagcttcctgttcat
gttgttgtcgatccggtccttggcaaagtactgcggcctcatcaacgagagggtgtaaaa
ttcctctgggactgtgtgacgggcagacgcatccctgactcgtacggctgcatcatggcg
gatgaaatgggtctgggcaagaccctgcagtgcatcgcgctcatgtggacactcctgcgg
cagagcccagattgtaaaccggagatagagaaggccatcgtggtgtctccctccagcttg
gtgcgcaactggtacaatgaagtgggtaaatggctgggaggacgcatgcaaccactggcc
attgatggaggcacaaaagaggagattgatcgtaaattagcgggcttcatggcacagcat
ggcttgagggtgccctctccgatcctcatcatctcatacgaaacattccgtcttcacact
ggagtcctgcacaagggaaaagtcggcctggtcatttgtgatgagggccaccggctgaag
aactctgacaatcagacctaccaggcactgaatgccatgaatgcccagagacgagtgctc
atatctgggactcccattcagaacgacctgctggagtacttcagcctcgtgcactttgtc
aacgctggaatccttggcactgctcaggagtttaagaaacgctttgagattccaatcctg
aagggtcgtgatgccgacgccagcgataaggacaggaccgctggagaagacaaactcaag
gagctcatcagtattgtcagcggatgcctgattagaaggacctcagacatactttcaaag
tacctccctgttaagatcgagcaggttgtctgttgcagactcacccccctgcagagtgag
ctgtataagcgcttcctgcggcaggccaagcctgtggagagccttcaggggggcaagatc
agcgtctcctccctctcctccatcacctcgctcaagaagctctgcaaccatccttctcta
atctatgacaagtgtgtggagggggaggagggctttgagggggctctggatctcttcccc
tccggctacagcactaaggctgtggagcctcagctctctgggaaaatgctggtgctggat
tacatacttgcaatgacaaaaagtacaacaagtgataaagtggtgctggtctccaactac
acccaaacacttgatatgtttgagaagttatgtcgaactcggagatatctctatgttcga
ctggacggaaccatgtcaatcaagaaaagagcaaagatagtggaaaagttcaacaatccc
tctagccctgagttcatcttcatgctgagcagcaaggcaggagggtgtggcctcaatctg
atcggagccaatcggctggtgatgttcgaccccgactggaatccagccaatgatgagcag
gccatggcccgtgtttggagagatggtcagaagaagacctgcttcatctacaggctactt
tcatcgggtactattgaagagaagatcctgcagaggcaggcccataagaaggctctgagc
agctgtgtggtggacgaggagcaggacgtggagagacacttctccctgggagagctgcgc
gagctcttctccctcaacgaggacaccaccagtgatacacacgacaagtttcgctgcaag
cgctgtgtcaacgggcgacaggtgcgccctccccccgaggacgcggactgcaccagtgac
ctgtccctctggcagcactgctcggacaagaggggactgagggaccccatgctcaccgcc
gcctggggcgccactgtctccttcgtcttccaccagcgctctcacgaggaccagagaggt
gtagtgtga
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