KEGG   Clupea harengus (Atlantic herring): 105895164
Entry
105895164         CDS       T09045                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105895164
   04121 Ubiquitin system [BR:char04121]
    105895164
Enzymes [BR:char01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105895164
Membrane trafficking [BR:char04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    105895164
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105895164
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 Zn_ribbon_19 zf-rbx1 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-C3HC4_3 zf-Nse DUF8608 FAR1_N zf-RING_16 zinc_ribbon_16 C1_2 RING_Ste5 zf-RING_Vps41 U-box_ZFPL1 HypA
Other DBs
NCBI-GeneID: 105895164
NCBI-ProteinID: XP_012677199
Ensembl: ENSCHAG00000021970
UniProt: A0A6P3VNU6
LinkDB
Position
10:complement(23108098..23113924)
AA seq 306 aa
MAEAPPCPSNRFFCHRCSTEINPRLPDYTCPRCDSGFIEELLEERSSENGSTSSSDQNQQ
RFENADHHLFTFPSAYGQFALGIFDDTFDLGSGLPPEDNRDAENRREREMASRQRYGARQ
PRGRHVPRRHTVRHEGVPTLEGIIQQLVNGIIAPTAVPNIGVGPWGVLHSNPMDYAWGAN
GLDAIITQLLNQFENTGPPPADREKIKNLPAVEITDEHVGSGLECPVCKEDYSAGETVRQ
LPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPLGMSGMNSPMGPLNNESFPNNE
RAPDNS
NT seq 921 nt   +upstreamnt  +downstreamnt
atggcagaagctccaccatgtcccagcaaccggtttttctgtcataggtgttcaacagag
atcaacccccgtctccctgattacacatgccctcgttgtgactcgggctttattgaagag
ttactagaagagagaagctcagaaaatgggtctacatcaagcagtgaccaaaaccaacag
aggtttgagaatgcggaccaccatttgtttacatttccctcggcgtacggacagtttgca
ctgggcattttcgacgacactttcgaccttgggtcaggactgccaccggaagacaatcgg
gatgcagaaaaccgacgggaacgtgagatggcatcccggcagcggtatggtgccaggcag
cctaggggacgccatgtccctagaaggcacacagtacggcatgagggtgtgcctacccta
gagggaattatccagcagctggtgaatggaataattgcacccacagcagtgccaaatatc
ggtgtgggaccttggggggttcttcactcaaaccctatggattacgcttggggtgctaat
ggattagatgcaatcataacgcagttactaaatcagtttgagaacactggcccaccacca
gcagatagggaaaagatcaaaaacctccctgctgtggaaatcacagatgaacacgttggc
tccggtcttgagtgcccagtgtgcaaagaagactacagtgctggcgagactgtgaggcag
ctcccatgtaatcatttatttcataatgactgcatagtgccctggctggaacagcatgat
acttgcccggtgtgcaggaaaagcttgagtggtcagaacacggccacggacccgctcgga
atgtcagggatgaactctcctatgggccctctgaacaatgaaagctttccgaacaacgag
agagcgccagacaactcgtaa

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