Clupea harengus (Atlantic herring): 105895225
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Entry
105895225 CDS
T09045
Symbol
ube3a
Name
(RefSeq) ubiquitin-protein ligase E3A
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105895225 (ube3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105895225 (ube3a)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105895225 (ube3a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
105895225 (ube3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
BUD22
NPR3
Autophagy_act_C
Cwf_Cwc_15
DDHD
MFAP1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
105895225
NCBI-ProteinID:
XP_012677296
Ensembl:
ENSCHAG00000005340
UniProt:
A0A6P8G4N3
LinkDB
All DBs
Position
10:complement(24188317..24194668)
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AA seq
771 aa
AA seq
DB search
MNYKDTVLGEDDFSELNFLTETKVCEILAVCEENKDYTPLIRAIGRVFSNSEFLMRSFRK
TKEQSPDKLKSRQAENKTEAEQGASSSSTATSKPSTSKKAEKKDDKSGDDDSDDSDDDDD
DDDDDDDEVTVDIDSLRRVYDKILPHEQIEAAIVNALVYMMPSVESELTYHDAYSFDHNY
LNLFVIIMENTNLHSPEYLESAFPLFCKAMSALSLPGQARLARLWSEFATEHILRLMETF
QQLITYTVVCNDFDNENLVNEDETVVAAVKCLKVVYFANILAGRLDLDQNEEDDDMLIES
NDLTLQELLGEEERSPRGPRVDPLEVELGVRASDCRCPLISFEEFINEPLNEVLEMDKDY
VLFKVNTEGKFAFMNCPFILNPVTKNQGLYYDNRIRMYSERRITALYSMVDGQQANPYLR
LKVRRDHLIDDALIRLEMIAMENPSDLKKQLYVEFEGEQGLDEGGVSKEFFQMVVEELFN
LDIGMFTYDETTKVFWFNSSSLENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGK
KGTLLDLADSHPPLYRSLKEILDYEGNVEADMMLTFQISQTDLYGNPVTHDLREFGDDIP
VTNDNRKEFVSQYADYVLNQSVEVQFKAFRQGFHQVTNESPLKYLFRPDEIELLICGSRN
LDFRALEESTDYDGGYNKESRVIKDFWEIVHSFGDEQKKLFLQFTTGTDRAPVGGLGKLK
MIIAKNGEDSDRLPTSHTCFNALLLPEYSTKEALRERLLKAITYAKGFGML
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaaagataccgttctgggggaggatgacttcagtgagctgaacttccttact
gaaaccaaggtgtgcgagatcctggcagtctgcgaagagaataaagactacacccctttg
attcgggccataggcagagtgttttctaactcagagttcctcatgcgaagtttccgcaag
accaaagaacagagcccagacaagctaaagtcacggcaggccgagaacaagacagaggcc
gagcaaggggcgtcatccagctcaacagctacctctaagccctctactagcaagaaagca
gagaagaaggatgacaaaagtggtgatgatgatagtgatgatagtgatgatgatgatgat
gatgatgatgatgatgatgatgaggtgacagtggacattgatagtttgagaagagtgtat
gacaaaatattgccccatgagcaaatcgaagccgccatcgtcaatgccttggtgtatatg
atgccaagcgtggagagtgagctgacctaccacgacgcgtattccttcgaccacaattac
ctcaacttgtttgtaataataatggagaataccaaccttcacagcccggagtacctcgag
tcagcatttcctcttttctgcaaggccatgagcgcgctttccctccctgggcaagcacgc
ctggcgcgcctgtggtcagagtttgccaccgagcacatcctccgactgatggagactttc
cagcagctcatcacttacacggttgtctgtaatgactttgacaacgaaaacttagtcaac
gaagatgaaacggtggtggccgcagtcaagtgtttaaaggttgtctacttcgctaatatt
ctggccgggaggctggacttggatcagaacgaggaagatgatgacatgctgatagagtcc
aatgacctgacgttgcaagaactgctgggggaggaagaacgaagccctaggggccccagg
gtggaccctctggaggtagaacttggtgtccgagcgtctgactgccgatgtccgctcata
tcctttgaggagttcattaacgaaccgctgaatgaggtgctcgaaatggacaaggactat
gtcctttttaaagtgaacacggagggcaagtttgccttcatgaactgccctttcatcctt
aatcctgtgactaagaatcagggactgtactacgacaacagaattcgaatgtacagtgaa
cgccggatcactgcgctgtacagtatggtcgatggacaacaagctaacccttatttacga
ctcaaagtccgaagagaccatctcattgatgatgcattgatcaggctggagatgattgcg
atggagaacccctcagacctgaagaagcagctctacgtggagtttgaaggagaacaaggg
ctggatgaaggaggagtttccaaagagttttttcagatggttgttgaagagctcttcaac
ctagatattggcatgttcacctatgacgagacaaccaaggtgttttggttcaactcatct
tcactggaaaatgagggccagtacacactcataggaattgtcttaggcctggccatatac
aacaactgcatcttggatgtgcactttcccatggtggtttacagaaagctgatgggcaag
aaaggaacccttctggacttagcggattctcacccgcctctctatcggagtctcaaagag
atactggattacgaaggcaacgtagaggccgacatgatgctcaccttccaaatctcacaa
actgacctatatggaaatcctgtcacgcatgacctgagagaatttggagacgacatccct
gtaaccaacgacaacagaaaggagtttgtgtctcagtatgctgattatgtgctaaatcaa
agcgtggaggtgcagttcaaggctttcagacaaggctttcaccaggtgactaacgagtcc
ccgctgaagtacctgttccggcccgatgaaatagagctgctgatttgcggaagcaggaac
ctggacttccgtgcccttgaagagagcacagactatgacgggggctacaacaaagagagt
cgtgtcattaaagatttctgggaaattgtgcactctttcggagacgagcagaagaagctt
tttctccagttcactactggcactgacagagcacctgtgggaggccttgggaaactgaag
atgatcatagccaaaaatggcgaggattcagacaggttacctacatcccacacttgcttt
aatgccctgttgcttcctgaatattctaccaaagaggcgctaagagagagactcctaaaa
gccatcacttacgccaaaggatttggcatgctgtga
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