Clupea harengus (Atlantic herring): 105895323
Help
Entry
105895323 CDS
T09045
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105895323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105895323
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105895323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
105895323
NCBI-ProteinID:
XP_031427145
Ensembl:
ENSCHAG00000018014
UniProt:
A0A6P8FUS7
LinkDB
All DBs
Position
8:4066079..4071704
Genome browser
AA seq
750 aa
AA seq
DB search
MAINPQSFKLEIDDRSVEERRKDTERTNAKKKRNFVVSALENDRSEKDKGPMDSKYIEDL
GEPESTIRINLGFLNRNKGDPNQESLRRRLFEAVSSRDVTQLQETEEYLKRNGKLLSDSV
YRLDGKTPLVKALLNLKKGENETVKYLLDIAEKMGDLQEFINVAHTDSYYFGQTALHVAI
ERRSKYFVELLVEKGADVHAKACGKFFQLRDGPCFYFGELPLSLAACTNQREIVDFLLEN
QYQSVDVRETDSQGNMVLHALVVVGDNSSENTDFIIKMYDHILTKAAQLHPKVKLEEIKN
NQGLTPIKLAAKTGKIKLLEHMMHREFHGQESIRFSRKFTEWAYGPVYGSLYDLGSLDSF
EKNSVLEIVVYGSEIPNRLEMLQVEPLNRLLDEKWNRFAHRIFLFRFVMYCLYLCIFTSV
SYFGNRKMLLDIGRKRPNLQSLLIDGYFELIFFLQALLCIISFVLYWCGQKEHLCFLVLS
LVLSWINLLYFCRGSRHMGIYSVMIQKILLGDILRFLLVYIVFLIGFSAAVVTLMDEPED
LNNTTSVSSNQTSLRPDSDSDESEKPTFKSFHFTTQELFKFTIGMGDLEFTEQYRYTEMF
YVLLISYIVLTYILLLNMLIALMSSTVAGVSEESTNIWKLQRAITILDMERILPLGLRKR
LRCGEKKDLGGSAGDECRWCLRVEEMTWNQVGVRDTICEDPGSHKSMKMSTPAPTSEKGK
GWSLLRRVGLTRRASNSERGQTSLQSPGQA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccataaatcctcaatcttttaagctggaaattgatgaccgaagcgttgaagagaga
agaaaggatacagagaggacgaatgccaaaaagaagaggaatttcgttgtttctgcactg
gagaatgacagatcagagaaagacaaggggcccatggactccaagtacattgaggacctg
ggggagccagaatccacgattagaattaatttgggatttttgaacaggaataaaggtgac
cctaaccaggagagcttgaggcggaggctgtttgaagctgtgtcttccagagatgtcaca
cagcttcaggaaacagaggagtatctgaagagaaatggcaaattgctttctgactctgtc
tatcgtttggatggcaaaactcccttggtgaaggctctactcaacctgaaaaagggggaa
aatgaaacagtgaaataccttctggacattgctgagaaaatgggagacctgcaggagttt
atcaatgttgctcatactgacagctactactttggccagactgcccttcacgtagccatt
gagagaaggagtaaatactttgttgagcttctggttgagaaaggtgctgatgtccatgcc
aaggcctgtgggaagttctttcagttgcgtgatggaccctgcttctattttggagagcta
ccattgtccctggctgcctgcaccaaccagagggagatagttgacttcctgttggaaaac
cagtaccagagtgtagatgtacgcgagacagactcacagggcaacatggttctccatgct
ctggttgtggtcggagataacagctctgagaacacagattttattattaagatgtatgac
cacatcttgaccaaagctgcccagcttcacccaaaagtcaagctggaggaaatcaagaac
aaccagggcctcacaccaattaaactcgcagccaagacaggcaagataaagttgcttgaa
cacatgatgcatcgagagttccatgggcaggagagcattcgcttctcccgcaagttcact
gagtgggcctatgggcccgtctatggttcactatatgacctgggatctctggactctttt
gagaagaactctgtgctggagatagttgtctatggcagcgaaatcccaaatcggttggaa
atgcttcaagtggagccacttaatagactgttggatgagaaatggaacagattcgcacat
cgaatctttctcttcagatttgttatgtattgtctgtacctctgcatcttcacgagcgtt
tcgtactttggaaacaggaaaatgttactagatatcgggaggaaacgtccgaacttgcaa
tctttgctgatcgatggatactttgaactgatttttttccttcaggctctgctctgcatc
atctcctttgtgctctactggtgtggccagaaggaacacttgtgctttttggttttgagt
ctcgtcctcagctggatcaacctgctctacttctgcaggggatccagacacatgggcatc
tacagcgtcatgatacagaagatacttcttggtgatatcttacgcttccttttggtctac
attgtcttcctcatagggttttcagccgctgtggtcacactgatggatgagccagaagat
ctcaataacacaacttcagtgtccagcaatcaaacgtctcttcggcctgatagtgactct
gatgaaagtgagaagccaactttcaagagcttccacttcactactcaggagctgttcaag
ttcaccataggcatgggggacctggagttcactgagcagtaccgctacacagagatgttc
tatgtgcttctcatctcctacatcgtcctcacctacattctgctcctcaacatgctcatc
gccctcatgagcagcactgtggcaggtgtctcagaggagagcaccaacatttggaaacta
cagcgtgccattactatcttggacatggagaggattctaccactgggcctcaggaagagg
ctgcgttgtggggagaagaaagacctaggtggctccgcaggtgatgagtgtcgatggtgc
ctcagagttgaggaaatgacatggaaccaggtgggagtcagggacaccatttgtgaggat
ccagggagccacaaatccatgaagatgtcaacacctgcacccacatcagagaagggaaag
ggctggagcttgctgaggagagtgggtctgactcgtcgtgcttccaactctgagcgtggc
cagacgagtctgcagtcacctggccaggcctga
DBGET
integrated database retrieval system
