Clupea harengus (Atlantic herring): 105895393
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Entry
105895393 CDS
T09045
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 2
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105895393 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105895393 (rab11fip1a)
Membrane trafficking [BR:
char04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
105895393 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
105895393
NCBI-ProteinID:
XP_012677481
Ensembl:
ENSCHAG00000017140
UniProt:
A0A6P3VPK7
LinkDB
All DBs
Position
7:complement(26998602..27023419)
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AA seq
693 aa
AA seq
DB search
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQMAKDKFSTSVAEKCVAPVW
KEEASFDLPLFHQGNADRCTLHIIVMHRALVGLDKLLGQAVVNLLDLHDNRSRKKSDWFK
LLDKNGKADKDRGEVLLDIQFMRNNLTASMFDLSMQDKPRSRLAKLKDKVRGKKSDGFSD
SASAIVPSVSQVLTDSEGEGDAHTDSPSTKKKSKLKSLFAPKSNLQRNHSQSMSVLGTLP
EKNSPLSASRSSGLNVESPDVKRKIGLGKFGLGHKRTGSNDSKASQGPFSLLGRSKQGAA
DPNSLCINGSHVYSEEAENKSGSTLSLNSSGQGSVEDVRRQHERNVSDASTDSFKALSIP
TYKQETQEKKGNAQQRLREDDEEEERESETKMQAEEKQRQAEEKRRLAEGKRIQEMLHRQ
EEQEKKRMQERQRKIEEEEEKKRKREEERKRLEEQEEAKQAEEQERRRQQQQEEARRAEE
QRHHEETRVTDRISSLFGIGRKKEEKKEEQHQESPPTAAPRRSAKELEVPASTNPFEEIP
LSPDPPNPIAGQGPVEVQRGVLGPHAPSGGFPSRTAKVSAVKPRPHPVKPLSSTESQQHP
SSSSSSSSIAVSKDLKSISISDTPEKVKFADSGPYTQLTQEELITLVVKQQNELTKRDEK
IVELEEYIDNLLVRVIDEYPSILMSLAAAKGFH
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagatcagagccaacaatggtatcctacgagtgtacaggtaacagtgttc
caagcaaggaacttgagaatcaaaggcaagaatggcaccaacgacgcgtacgccatcatg
caaatggccaaagacaaattttcaacgtcggtggcagaaaaatgtgtggcaccggtttgg
aaggaagaagcctcttttgacctgccgctcttccaccaaggcaatgccgaccgctgtact
ctgcatatcatcgtaatgcaccgggcgctggtgggtctggataagctacttggacaggca
gtcgtcaaccttttggacctccacgataacaggtcccggaaaaagagcgattggttcaag
ctgttggataaaaatgggaaggccgacaaggaccgtggagaagttctgctggacatccag
ttcatgaggaacaacctgaccgccagcatgtttgacctctccatgcaggacaaaccacgg
tctcgcctggccaagctcaaggacaaggtccggggaaagaagagcgatggcttctctgac
tccgcgtccgccattgtgccttcagtcagtcaggtgctaaccgacagcgaaggggaaggg
gacgcccacacagactctccgagcacaaagaagaagtccaaactcaagtccttattcgct
cccaagtccaacctgcaacgcaaccattcccagtccatgtccgtcttgggaaccctccca
gagaagaactctcccctcagtgccagccgatcctctggccttaacgttgagtctcctgat
gtgaaaaggaagatcggtcttggcaagtttggtcttggtcataaacgcacagggagtaat
gacagcaaggcgtcccagggccccttctccctgctaggccgctccaagcagggcgccgcg
gacccgaacagcctgtgcatcaatggcagccacgtctactccgaggaggccgagaacaag
agcggctccaccctcagcctgaacagctccggacagggctccgtggaggacgtgaggagg
cagcacgagaggaacgtctccgacgcctccaccgactccttcaaggccctgagcatcccc
acctacaagcaagagacgcaggaaaagaaaggcaacgcacagcagcgcctcagagaggat
gatgaagaggaggagagggagtccgagacgaagatgcaggccgaggaaaagcagaggcag
gcggaggagaagcgcagactcgcagagggaaagcggatccaggaaatgctgcaccggcag
gaggagcaggagaagaagcggatgcaggagcggcagaggaagatagaagaggaggaggag
aagaagagaaaaagagaagaggagcgtaagaggctggaggagcaggaggaggcgaagcaa
gcagaagagcaggagcggaggaggcagcagcagcaggaggaggcgcggagagccgaggag
cagaggcaccatgaggagacccgagtaacggacaggatctcatctctgttcggcatcggg
aggaagaaggaggagaagaaggaggagcagcaccaggagagccccccgaccgcagctcct
cgtcgctcagccaaggagctcgaggtccccgcctctacaaaccccttcgaggagatccca
ctgagcccagacccacccaaccccatcgctggccagggcccagtggaggtccaaagagga
gtcctcggcccccacgccccaagcggaggcttccccagtcgcacggccaaggtgtctgcc
gtcaaaccaaggccccatccagtgaagcctctgagctcgacagaaagccaacagcatccc
agcagcagcagcagtagcagcagcattgcagtgagcaaagaccttaagtccattagcatc
agcgacacaccagagaaagtcaagtttgcagacagtggcccctacacccagctcactcag
gaggagctcatcacccttgtggtcaagcagcagaatgagctcaccaagagagatgagaag
atcgtggagctggaggagtacatcgataacctgctcgtgcgtgtcatcgatgagtatccc
agcattctcatgtcgctcgcagccgccaagggcttccactag
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