Clupea harengus (Atlantic herring): 105895417
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Entry
105895417 CDS
T09045
Symbol
tdrd7b
Name
(RefSeq) tudor domain-containing protein 7B isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105895417 (tdrd7b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105895417 (tdrd7b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
OST-HTH
DUF7515
Motif
Other DBs
NCBI-GeneID:
105895417
NCBI-ProteinID:
XP_031440508
Ensembl:
ENSCHAG00000016110
UniProt:
A0A6P8GP49
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All DBs
Position
18:14305739..14329907
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AA seq
1139 aa
AA seq
DB search
MNVMEAVQVPIQSASPAMTVGAAGARMADLELVKKMLRAVLQSSKSGVSLGRLQADYKEL
TGELIPHKQLGHTTLDALLLTMPSVVRMERNRNGEMVCYATVCSETAHIAKLVARQRTAK
KTGRPQLVNCQMRVKPAAPLVLNAKPRTSLRQPDHRGRLGRGGGRPGGYGDSRQGHVRDG
QADGRGNASQNKAQNAPARKGSSASDRSDKRMTLPSRFQKEVHAHLSRNPQQTSAPANLN
ESSQQAKPKTAQAGSYNPGQVQGRLKEILNKYSNGFWVSKLPQLYRELYKQELPGEALKD
LEQWSHICTVEKPCSTNPAELLLYPAKESSSTPCTPTPTPPGGDRHSPLPQKQPRPRTPI
VTTSAPTSQSPSAPTPTGGTPTPSLTPELRRNLGELLLKYSSGLWAHALPKLYQDTYKSA
LPEHVLQNLALLADFCTIDYPMPDNPKRAILYVRSAEDENSNRAELGDTRALAEVGKRLS
CQPPVPALQIPREEYPSVLVVEAASTNRVVLRYIGEGYSQAQEKLEDEMREFYGQDNTRK
ALASPALGQLAAVRAEEEEEILRAQVSEVMADKVKVYYVDHGFSEVISKTKLLELHEKFF
KLPFQATKCTLAGLEQFSQETSVLKKFESMASGKILLAEILKREETPLMVLYDTSQDDDV
NINAACMKALQDKSLGSPLQVNSAYMNVSVTSVCSDGTIYCQLPSRGLAKLTEVLGKTEV
YFHSQVTSEFLVSRPFCGKGCLARYKSKWSRVEITNLHGSRVLDILFIDLGIQASVEVIE
LREFPPPFLRDLIAIPPQAVKCCLADLSVSVGSWTPDAVQWLRDTVLHSSDCSIKIAKLE
ESKRLVHVYLFTSKNFHDTGRSVNRQLADSDLWKHQKDVFLSSHAPSPKTTPGTASHYHR
SGSPTSTNGCRAPQLRRAHSLPASRATPPTTPPHAPPGRLQMPPQLELPPAGQNMDIYVS
VACHPGHFVLQPWQDMYKLVVLMGEMILHYNKTDGKPVTVEKNQVYAAKVENNWHRVLVK
GILTNGLVSVYELDYGKHELVSGTQLRPLIQEFRQLPFQGIKAQLAGVKPRQWSEEVSIV
FRNHVEKKPLVAQLETVQEAQNAWDRKVTVYLVDTSQEEHDVWVHDIMAEFADELTKAA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatggaagctgtacaagtccccatccagtcagccagcccagcaatgactgta
ggtgcggctggagccagaatggcggacttggagcttgtgaagaagatgctgcgagcggtg
ctgcagtccagcaagagtggcgtgtcgctgggtcgcctgcaggccgactacaaggagctg
acgggcgagctcatcccccacaaacagctgggccacaccacactggatgccctgctgctc
accatgccctctgtggtccgcatggaacgcaaccgcaacggggagatggtgtgttatgcc
acagtgtgcagtgagacggcacacatcgccaagctggtggcgcgccagcgcacggccaag
aagactgggcgacctcagctggtcaactgtcagatgagggtgaaaccagccgctcctctg
gtgctaaatgccaagcccaggacgtcgctgcggcaacccgatcaccggggacgactaggg
cgggggggaggccgtcctggtggatacggagactctcggcaggggcatgtgagggacggg
caggcagacggcaggggcaacgcctcccaaaacaaggcccagaacgcacctgctcgaaaa
ggctcctctgcctcggacaggtcagacaagaggatgacccttccctccaggtttcagaaa
gaggtccacgcgcatctctccaggaacccccagcagactagtgctcctgccaatttaaac
gagagctcccagcaggcaaagcccaagacggcccaggcggggtcctacaacccagggcag
gtgcagggccgcctgaaagagatcctgaacaagtacagcaatggtttctgggtgtccaag
ctgccgcagctctaccgggagctgtacaagcaggagctgccgggcgaagccctcaaagac
ctggagcagtggagccacatctgcaccgtggagaagccttgcagcaccaacccagccgag
ctcctcctctaccctgccaaggagtccagcagcaccccctgcacccctacccctacccct
ccagggggtgaccgtcactctcctctcccccagaagcaaccccgtccccgcacccccatc
gtcaccaccagcgcccccacctcgcagagcccctccgcgcccacccccacaggtggcacg
ccgaccccctccctcaccccggagctgcgcaggaacctgggggagctcctgctgaagtac
agcagcggcctgtgggcacacgcgctgcccaagctctaccaggacacctacaagagcgcc
ctgcccgagcacgtgctccagaacctcgcgctgctcgccgacttctgcaccatcgactac
cccatgcccgacaaccccaagcgggccatcctgtacgtgcgctcggcggaggacgagaac
agcaaccgggccgagctgggcgacacgcgggcgctggcggaggtgggcaagcgtctgagc
tgccagccacccgtgcccgcgctgcagatcccgcgcgaggagtatccgtcggtgctggtg
gtggaggccgccagcaccaacagagttgtgctcagatacatcggagagggctactcccag
gcccaggagaagctggaggatgagatgagggagttctacggccaggataacaccaggaag
gccctggcctctcccgccttggggcagctggcggctgtccgtgccgaggaagaggaggag
atccttcgcgcccaagtgagcgaagtcatggcggacaaggtcaaggtatattatgtggat
catgggttctctgaggtcatcagcaaaaccaagctgctggagttgcatgagaagttcttc
aaactgcccttccaggctactaaatgcacactggccgggctggagcagtttagccaggag
acgtctgtgcttaagaagttcgagtccatggcgagtgggaagatcctgctggctgagatt
ctaaaacgtgaggagacgccactcatggtcctgtacgacacgtcgcaggatgatgatgtc
aacatcaacgccgcctgcatgaaggccctgcaggacaagtccctggggagccctctgcag
gtgaacagtgcctacatgaacgtgagcgtgaccagtgtgtgttcggacgggaccatctac
tgccagcttccatcccgtggtctggccaaactcacagaggttctggggaagacagaggtg
tacttccactcccaggtgacgtcagagttcctggtgtctcggccgttttgtgggaagggc
tgtctggcgcgctacaaaagcaaatggtctcgtgtggagatcacaaatctgcatggtagt
agagttctggatatcctcttcattgatttggggattcaggcgtccgtagaggtcatcgag
ttgagggagttcccgccccccttcctgcgtgacctcatcgccatcccaccccaggcggtg
aagtgttgtctggctgacctatctgtgagtgtgggatcctggaccccagatgctgtgcaa
tggcttagagacacagtactgcattccagtgactgcagtataaagatcgccaaactggag
gagagcaagcgtctggtgcacgtgtacctcttcaccagcaagaacttccacgacacgggc
cgcagcgtcaaccgccagctggccgactctgacctctggaaacaccagaaggacgtcttc
ctcagcagccacgccccctcacccaaaaccacacccggcacggccagccactaccaccgc
tccggaagccccacttccaccaatgggtgtcgagcgcctcagctccgacgtgcccattcg
ctcccggcctccagggcgaccccgcccaccaccccgccgcatgcccctccggggcgtctg
cagatgcccccgcagctggagttgcccccagcagggcagaacatggacatctatgtgtcg
gtggcgtgccacccggggcactttgtgcttcagccctggcaggacatgtacaagctggtg
gtgctgatgggggagatgatcctccactacaacaagaccgacggcaagcccgtcaccgtg
gagaagaaccaggtgtacgctgccaaggtggagaacaattggcaccgtgttctggtgaag
ggcatcctgaccaacgggctggtgtccgtgtacgagctggactatggcaaacacgagctg
gtcagcggcacccagctgcgcccgctcatccaggagttccgccagctccccttccagggc
atcaaagcccagcttgcaggtgtaaagcctcgacagtggtcggaagaggtttccatcgtg
ttccggaaccacgtggagaagaagccgctggtggctcagctggagacggtccaggaggcg
cagaacgcctgggaccgcaaggtgaccgtctacctggtggacacctcgcaggaggagcac
gatgtctgggtgcacgacatcatggccgagttcgccgacgagctcaccaaggctgcctag
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