Clupea harengus (Atlantic herring): 105895503
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Entry
105895503 CDS
T09045
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105895503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105895503
Spliceosome [BR:
char03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105895503
Complex C
U4/U6.U5 tri-SnRNP related factors
105895503
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
Cgr1
C2H2-zf_KIN17
DUF4250
Herpes_gp350_A
DUF6277
zf-C2H2
MG280
Motif
Other DBs
NCBI-GeneID:
105895503
NCBI-ProteinID:
XP_012677592
Ensembl:
ENSCHAG00000004747
UniProt:
A0A6P3VPJ0
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All DBs
Position
18:1478666..1482437
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AA seq
198 aa
AA seq
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MASGSGNKSDFRRKWDKDEYEELAQKRLNEERDKKDGKPAPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEVNKKKMEEKQKEYDFEERMKELREEEEKAKAYKKEKQKEKKRKAEEDLNFEEDD
EMAAVMGFSGFGAAKKNH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcagtgggaacaagagtgactttcggcgcaagtgggacaaagacgaatac
gaggagctcgcgcagaaacgactcaacgaggaacgcgataaaaaagatggcaagcctgca
cccccagtcaagcgggagctcctgcggcaccgagactacaaggtggacctggaatccaaa
ctggggaaaaccatcgtcatcacaaaaaccaccccccagtcggagatgggcgggtattac
tgcaatgtatgtgactgtgtcgtgaaagattccattaacttcttggaccacatcaatggg
aaaaaacatcagagaaacttgggcatgtccatgagggtggagcgctcttccttggaccag
gtgaagaaacgttttgaagtcaacaaaaagaagatggaggagaaacagaaggaatatgac
tttgaggagcggatgaaggagcttcgagaagaggaggagaaggccaaagcttacaagaag
gagaagcagaaagagaagaagcggaaggccgaggaggatctgaactttgaagaggacgat
gagatggctgccgtcatgggattctcaggatttggcgctgctaagaagaaccattga
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