Clupea harengus (Atlantic herring): 105895509
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Entry
105895509 CDS
T09045
Symbol
ppp2r5b
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char04110
Cell cycle
char04114
Oocyte meiosis
char04261
Adrenergic signaling in cardiomyocytes
char04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105895509 (ppp2r5b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105895509 (ppp2r5b)
04114 Oocyte meiosis
105895509 (ppp2r5b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105895509 (ppp2r5b)
09158 Development and regeneration
04382 Cornified envelope formation
105895509 (ppp2r5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105895509 (ppp2r5b)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895509 (ppp2r5b)
03036 Chromosome and associated proteins [BR:
char03036
]
105895509 (ppp2r5b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105895509 (ppp2r5b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105895509 (ppp2r5b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105895509 (ppp2r5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF6985
Motif
Other DBs
NCBI-GeneID:
105895509
NCBI-ProteinID:
XP_012677596
Ensembl:
ENSCHAG00000016958
UniProt:
A0A6P3VPP1
LinkDB
All DBs
Position
18:complement(2166039..2184097)
Genome browser
AA seq
503 aa
AA seq
DB search
METPTKLPPSSPSSPTTGFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTP
LPLLKDTPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESLATNRGVL
IEPLYPEIIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDF
QPSMAKRYIDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLR
FIYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHTAKSLSIFHAQLAYC
VVQFMEKDATVTESIIRGLLRYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRVQEPLFKQ
IAACISSPHFQVAERALYFWNNEYILSLIEENCQMILPLVFSTLYRVSKEHWNQTIVSLI
YNVLKTFMEMNSKLFDDLTASYKVEKQKELKRERERLELWRGLEEQQQRRLQSLMEASRN
QKNLLERENPAQSQPESSTTNTT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagactcccactaagctgcctccttccagcccttcttcacctactacgggcttttcg
gtgcccagcgcggagaaagtagatggctttccccgtcgctcaatgcgccgtgctcggcag
cgacgttcacacagctcctcacagttccgttaccagagctctcaagtggagctaacaccg
ctgcctttactgaaagatacccctgtggcggagctacatgacctcttctgtaagaagctg
cagcagtgctgcgtcctctttgacttcctggactgcgtggctgacctcaagggtaaagaa
atcaaacgcgctgccctcaatgaactggtggagagtctggccaccaacagaggggttctc
atcgagcccctctaccctgaaatcatcaagatgatttcagtgaatatctttcgtacactg
ccaccaagcgagaacccggagtttgacccagaggaagatgaacccacactggaggcctcc
tggccccacctacagctggtctacgagttctttttacggttccttgagagtcctgacttt
cagccctccatggccaagcggtacattgaccagaagtttgtccttcagttgctagaatta
tttgacagtgaggaccccagggagagggaatacctgaagactattctgcaccgtgtctat
ggcaagctgcttggccttcgagcctatatccgcaaacaaataaacaacatcttcctcagg
tttatatatgaaactgagcatttcaatggagtcgcagagctgctagagattctaggcagt
atcataaatggctttgctctgcctttgaagtcggagcataagcagttcctggtgagagtc
ctgatccctcttcacacggccaaatctctatccatctttcatgcacagctggcgtactgt
gtggtgcagttcatggagaaggatgccaccgttacagagtccatcatccgaggactgctc
agatactggccaaaaacgtgcactcagaaagaggtcatgttcctgggggagattgaggag
atcctggatgtgatcgagccatcccagttcatccgggttcaggagccgcttttcaaacag
attgctgcctgcatctccagccctcactttcaggtggctgagcgcgctctgtacttctgg
aataatgagtacattctgagtctcattgaggagaactgccagatgatcctgccgctagtc
ttctccaccctctacagagtctccaaagagcactggaatcagacgattgtttctctcatc
tacaatgttctgaagacctttatggaaatgaatagcaagctctttgatgacctcactgcc
tcctataaagtggagaaacagaaagagctgaagcgcgagcgagagcgtctggagctgtgg
cgcggcctggaggagcagcagcagcgtcggctgcagagcctaatggaggccagcaggaac
cagaagaaccttctggagagggagaaccctgcgcagagccagccagagagcagcacgacc
aacaccacctag
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