Clupea harengus (Atlantic herring): 105895511
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Entry
105895511 CDS
T09045
Symbol
ajuba
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895511 (ajuba)
03036 Chromosome and associated proteins [BR:
char03036
]
105895511 (ajuba)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105895511 (ajuba)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
105895511 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
105895511
NCBI-ProteinID:
XP_012677599
Ensembl:
ENSCHAG00000021423
UniProt:
A0A6P3VP53
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All DBs
Position
18:complement(2326077..2334193)
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AA seq
684 aa
AA seq
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MDRLGSKLLTKLKLTDSGSVKFSSSKKKNELANTNNNSNRSNTPTGTATHHGSTTTSSST
VATQTGGPSGRPSPQVTPSPTATSAASAVPTECSTMNELHPTSLAQLRRPSAQLRASFHM
SEGVSDVRAGGSGEGALRCDSEPQMQCGLSPRASLDQRRYSLELQQLVRRQQLLSQPPLS
MPPMYPPHPSCPRSATESGFMPEPERHKRFSLQEALFYKRLSSGGEPWDSVRPASLSHPP
QRALDGAGGMGLGGTGGFFPPGGTALSPCSSFSLQESLLTSPRSSFASSTASGGGGGGGS
PMGSRCSSNRTSGISLGYDSRYTPSGLLQQQLSSIQLGGVTSGQCYPYHGAGRPCSHSME
AWDYLEGATVGESRHSYPPATSRSAEGWAEHRAGLAEHEAERSRLSDLPGVRYQQELTRL
LLRDAAREGEDLMGGLTLQDLHITTAKPTPAAAAAAAANHHSSGGPLKAQEESGAARESV
ENRQEFFGPCVKCGKGVYGADNACQALDSLYHTRCFTCVSCGRTLRNKDFYNVNGSVYCK
EDYMFSGFQAAAEKCNVCGHLILEQILQALGNSYHPGCFRCIVCSKALDGVPFTVDYLNH
VYCVSDYNRAFAPKCAACLQPILPAEGSEEILRVVSMNKDYHFECYHCEECGKQLSDQAG
SQCFPLDGHLLCHACHMIRVARCT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggcagtaaactgttgacaaaattgaaactgacagattcagggagtgtg
aaattttccagttcgaaaaagaaaaatgaattggccaacacaaataacaacagcaaccgc
agcaacacccctaccggtacagccacacatcatggtagtaccaccacaagctcaagtact
gtggctacgcagactggcggcccgagtggaaggccctctccccaagtcactccctcacca
acagccaccagtgctgcctctgctgtgcccacagaatgcagtacaatgaacgagctccac
ccaacatccctggcacaactacggcgcccgtcggcccagctacgtgcttcattccacatg
tcggagggtgtgtcagacgttcgggcaggaggctccggtgagggggccttgcggtgtgac
tctgagccgcagatgcagtgtgggctgagtcctcgcgcctcgctcgaccagcggcgctat
tccctggagctccagcagctggtgcgccgccagcagctcctctcgcagccacctctctcc
atgccccccatgtacccgccccacccctcgtgcccgcgctctgccaccgagtcgggcttc
atgcccgagccggagcggcacaagcgcttctccctccaggaggcactcttttacaagcgc
ctgagctcagggggggaaccgtgggacagcgtccggcccgcctcgctctcacacccgccg
caacgggctctggacggtgcagggggaatggggctggggggtacgggtggcttcttccct
ccaggagggaccgcgctgagcccctgctcatccttcagcctgcaggagtcgctgctgacc
agccctcgctccagcttcgccagcagcacggccagcggcggcggagggggagggggcagc
cccatgggcagccgctgcagcagcaaccgcacaagtggcatcagcctgggctacgactcg
cgatacaccccctccggactgctccagcagcagctctcctccattcagctcggtggggtc
accagtgggcagtgttacccctaccatggagcaggcaggccttgctcacactccatggag
gcgtgggattacctggagggcgccacggtcggagagagccggcactcgtacccgcccgcc
accagcaggtctgcagaggggtgggcagaacatcgggcaggcctggcggagcacgaggcg
gagcggtcaaggctctcggacctccctggcgtgcggtaccagcaggagctgacgcgcctc
ctcctgagagatgctgcccgggagggggaggatctgatggggggcttgaccctccaagac
ctccacatcacgaccgccaaacccacacccgccgccgccgccgccgccgccgccaatcac
cactcctcaggtggaccgctcaaggcacaggaggagtccggagctgctcgagagtcggtg
gagaaccggcaggagttctttggtccgtgtgtgaagtgtgggaaaggggtgtatggggca
gacaacgcctgccaggctctggacagtctgtaccacacccgctgcttcacctgcgtctct
tgtggtcgcaccctgcggaacaaggacttctacaatgtcaacggctctgtatactgtaaa
gaggactatatgttctctggcttccaggctgcagctgagaagtgcaatgtgtgtggccat
cttatcctagaacagattctgcaggctctggggaactcgtaccacccaggctgtttcagg
tgcatcgtgtgctccaaagccctggatggggttccgttcacagtggactacctcaaccac
gtctactgtgtctctgactacaacagggcctttgctcccaaatgtgctgcctgtctacaa
cctatcttacctgctgagggcagtgaggagattcttagggtggtgtccatgaacaaagac
tatcactttgagtgctaccactgtgaggaatgtgggaagcagctctcggaccaggccgga
tcccagtgctttcctctggacggccacctgctgtgtcacgcctgccacatgatccgggtc
gcgcgctgcacatag
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