KEGG   Clupea harengus (Atlantic herring): 105895517
Entry
105895517         CDS       T09045                                 
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105895517 (syf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105895517 (syf2)
Spliceosome [BR:char03041]
 Complex B
  Other components
   Prp19-related factors
    105895517 (syf2)
 Complex C
    105895517 (syf2)
SSDB
Motif
Pfam: SYF2 AAR2_1st
Other DBs
NCBI-GeneID: 105895517
NCBI-ProteinID: XP_012677608
Ensembl: ENSCHAG00000015611
UniProt: A0A6P3VQK7
LinkDB
Position
14:complement(21167422..21171435)
AA seq 251 aa
MYSAIRHFLFTHFKMASGVKVSTPVPEEDAESLGSQKREDRLRKFRELHFKRNEARKLNH
QEVVEEDKRLKLPSNWEAKKARLEYDLMVDDKKKECADNGEDYHRVKLLEISAEDAERYE
KKKKKRNPDPGFSGYAEAQLRQYQRLTRQIKPDMESYERQREEYGDDFHPTSNSLIHGTH
VPTKDGVDRMVQDLEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAE
IKQNLERGTAV
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtattcagcgattcgtcacttcctgtttacacatttcaaaatggcgtctggtgttaag
gtgtctacacctgttcccgaagaagatgcagaaagcctcggatcccagaagagagaagat
agattaagaaagtttcgtgaacttcatttcaaaaggaatgaagctcgcaaactgaaccac
caggaggtggttgaggaggacaagagactgaagcttccatctaactgggaggcaaagaaa
gcccgcctggagtatgacctaatggtcgacgacaagaagaaggagtgtgctgacaacggg
gaggattaccaccgtgtgaaactgcttgagatcagtgcagaggatgctgagagatatgag
aagaagaagaaaaagaggaatccagacccagggttctctggctatgctgaagcccagctg
cgccagtaccagcggctcaccaggcaaatcaagccagacatggagagctatgaaaggcaa
cgagaggaatatggcgatgacttccaccccacctccaacagtctgattcatggaacccac
gtgcccaccaaagacggcgtcgaccgcatggtgcaggacctggagaaacagattgagaag
cgtgctaaatacagccgccggcgtgcctacaatgacgatgctgacattgactacatcaat
gagcgcaatgccaaattcaacaagaaggctgagcgcttctacggcaaatacacggccgag
atcaaacagaacctggaaagaggaactgctgtgtaa

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