Clupea harengus (Atlantic herring): 105895561
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Entry
105895561 CDS
T09045
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105895561 (sox19b)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105895561 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105895561
NCBI-ProteinID:
XP_031441118
Ensembl:
ENSCHAG00000005052
UniProt:
A0A6P8GQX5
LinkDB
All DBs
Position
18:complement(1608203..1610754)
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AA seq
293 aa
AA seq
DB search
MYSLMEHELKTSGQLQMHQNGQGMSPISANAHTGSKTPCPPGVDPMDKVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKYKP
RRKTKPMLKKDNQVGKYPLSAGNLLAAAAAQGSGGSPRMENYCWGPTGGYAGMQGEALGY
PQQLHRYDLSALQYPSSMTAAQTYMNGVNSYSSMPYGNSPQQGSPVMSMVKPEPVSHSPT
GPPSHHRGPLQGELRDMISMYIPGGDASDPNSQRGYSSVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtttgatggaacatgagttgaaaacttctggacaactgcagatgcaccaaaac
ggccagggtatgtcccctattagtgccaacgctcacacggggtctaaaaccccctgtcca
cccggtgtagacccaatggataaagtcaaaagacccatgaacgcttttatggtgtggtcg
cggggtcagcggcgaaagatggcacaggaaaaccccaaaatgcacaattcagaaatcagt
aaacgcttgggagctgaatggaagttgcttacggacgccgaaaagaggccattcattgat
gaagccaaacgtctacgtgcagtccatatgaaggactatcctgactacaagtataaacca
cgtcgtaagaccaagcctatgcttaaaaaggacaaccaggttggcaaatatccattatca
gccggcaacctgctggcagctgcagcggcccagggatcaggtggaagcccgagaatggaa
aattattgctggggacccacggggggatatgctggcatgcagggagaggcacttggttac
ccgcagcagcttcatcgttacgacttatcagccctgcagtacccgtcctcgatgaccgct
gcgcagacctacatgaatggcgtcaactcttacagctccatgccctacggtaacagcccc
cagcaaggaagtccggtgatgtccatggtgaaaccagagcctgtttctcactccccaact
gggcccccaagtcaccaccgagggcctctccagggtgaactgagggacatgatcagcatg
tacatccctggcggtgacgccagtgaccctaactcccagaggggctactccagtgtacag
cagcactatcttgggggaactgtacctctcactcatatctaa
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