Clupea harengus (Atlantic herring): 105895625
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Entry
105895625 CDS
T09045
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105895625 (arntl1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105895625 (arntl1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
105895625
NCBI-ProteinID:
XP_012677743
Ensembl:
ENSCHAG00000008334
UniProt:
A0A6P3VPA1
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Position
3:complement(2821765..2835669)
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AA seq
632 aa
AA seq
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MNLCDLMADQRMDISSTMNEFMSPSSTDLISSSISTPGMDYNRKRKGSTTDYQIDGFSFD
DSMDTDKDKQLGRDEQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD
KLTVLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKIL
FVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT
DITPGPSRLCSGARRSFFCRMKCNRPSVKMEEKDFSSTCSKKKADRKSFCTIHSTGYLKS
WPPTKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIVPQSMNGDIRVKPTEYVSRHAIDGKF
VFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKD
GSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSGSVLDGADPNYPQPASSPQSMDSSVLTS
GGDGGGKRALQIVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITSTP
PPDTCSPGGKKIQNGGTPDLPSAGMGPDSIGYPYSNNSIMSDNSHLSIDIMDDPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctgtgatctaatggcagaccaaagaatggacatttcttcaacaatgaacgag
ttcatgtcccccagctcaactgatctaatcagcagctctatcagcaccccaggcatggac
tacaaccgcaagaggaagggcagtacaacagactaccaaatcgatggcttttcatttgat
gatagcatggatacagacaaggataaacagcttgggagagatgaacaacaaggccgtatt
aaaaatgccagggaggctcacagtcagattgagaaacggcggcgggacaagatgaacagc
ttcatagatgagctggcgtctttagtgcccacctgcaatgccatgtctcgcaagctggac
aagttgactgtcctgcgcatggccgttcagcacatgaagacactccgaggggccgccaat
ccgtacactgaggccaactacaaacctgcatttctgtcggatgatgaacttaagcactta
atactgagggccgccgatggctttctctttgttgtcggctgtgatcgtgggaagatcctg
ttcgtttcagagagtgtttataaaatcctcaattatagccagaatgacctgattggccag
agtttgtttgattacctgcatcctaaagatattgccaaagtcaaagagcagctgtcgtcg
tcagacaccgcgccgcgggagagactcatcgatgctaaaactggccttcctgtgaagaca
gacatcactcctggcccgtctagactgtgctcaggggccagacgctccttcttctgccgg
atgaagtgcaaccgaccctctgtcaaaatggaggaaaaggacttctcctccacctgttca
aaaaagaaagctgaccgcaagagcttctgcaccatccacagcacaggctacctgaagagc
tggccgcccaccaagatgggcctggacgacgacaacgagcctgacaatgaaggctgcaac
ctgagttgcttggtggccattggccgtctgcaccctcacattgtgccccagtcaatgaac
ggagacattcgtgtcaaacccactgaatacgtctctcgccacgccatagatggcaaattt
gtgttcgttgaccagagggccacggctatacttgcatatttaccccaggaacttctaggt
acttccttctacgagtatttccaccaggatgacattggacacctggcggaatgtcacaga
caagtgctgcagatgcgggagaagatcaatacaaactgttacaagttcaagatcaaggac
ggctccttcatcaccctgaggagccgctggtttagcttcatgaacccctggactaaagag
gtggagtacatcgtctccacaaacaccgtggtctcaggtagtgtgcttgatggagcagac
cccaattacccccagcctgcttcatcgcctcagagtatggacagcagcgtgttgacgtca
ggcggtgatggtggagggaagcgtgcgcttcagatagtgcctggcattcccgggggcacg
cgtgctggagccggcaagattggccgcatgatcgctgaagaagtcatggagatccagaga
attcgaggctcgtctccctcaagctgtggttccagccccctgaacatcaccagcacgccc
cctccggacacctgctcgcctgggggaaagaagattcaaaatgggggaactccagacctt
ccctcagcaggaatggggccagattcgataggatacccatactcaaacaactcgatcatg
agtgacaactcccacctgagtattgacatcatggatgaccctggctccagcagccccagc
aatgacgaggcagccatggcggtgatcatgagcctgctggaggctgacgctggcctgggg
gggccagtagactttagcgacctgccctggcccttgtga
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