Clupea harengus (Atlantic herring): 105895635
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Entry
105895635 CDS
T09045
Symbol
afg3l1
Name
(RefSeq) AFG3-like protein 2
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105895635 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105895635 (afg3l1)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
105895635 (afg3l1)
Chaperones and folding catalysts [BR:
char03110
]
Other chaperones and cochaperones
AAA proteases
105895635 (afg3l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
AAA_16
TIP49
AAA_2
nSTAND3
RuvB_N
AAA_14
AAA_28
AAA_17
LonB_AAA-LID
Peptidase_M50B
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
105895635
NCBI-ProteinID:
XP_012677755
Ensembl:
ENSCHAG00000010658
UniProt:
A0A6P3VPQ8
LinkDB
All DBs
Position
3:3004534..3012994
Genome browser
AA seq
776 aa
AA seq
DB search
MALMMGLLSAAASPLRLSIRSLGRYSMVRTLCLTTRGYSANAVNRIASHYSRPLSYYANS
HLNFRLRYSTESPKGENPKESEPSSSGGGRSGDGSGGGGGRRGGKKDWWSRMQKGDFPWD
EKDFQYLALGAAGVSATILYLYFRDRGKEITWKDFVHRYLDRGVVDRLEVVNKQYVRVIL
VPRADAGDGSYVWFNIGSVDTFERNLETAQQELGLEPSHRVAVVYSSESDGSFLMSIIPT
LLLIGFLLFTLRRGTMGAGGGGKGGLFSMSQSNAKMMKDNIEVKFKDVAGCEEAKLEILE
FVNFLKNPQQYKDLGAKIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFV
GVGPARVRDMFTMARKNAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFN
TSTNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDPSMDK
DALARKMAASTPGFTGADIANVCNEAALIAARYLHESVNAKHFEQAIDRVIGGLEKKTQV
LQPTEKRTVAFHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLL
DRMCMMLGGRVAEQVFFGRITTGAQDDLKKVTQSAYAQIVQFGMSDKVGQVSFDLPRQGE
VVMEKPYSEATAELIDQEVRDLVDRAYQRTMELVLDKKDVVEKVGKRLLEKEVLDKADML
ELLGPRPFEERSTYEEFVEGTGSFEEDTSLPEGLKDWNKERSVVQEEEPSKEKQVA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggctcttatgatggggctactgtcggcggctgcttcgcctctacggcttagtataagg
tcgttgggacgctattccatggtcagaactctgtgtctgacaactcgagggtacagtgcc
aatgcagtcaatagaatcgcatcgcactactcaagaccattatcatactatgctaatagc
cacctgaacttccgactccgatactcaacagaatcgcctaaaggtgaaaatcctaaagag
tccgagccttctagcagtggcgggggtcgctcaggagatggaagtgggggtggagggggg
agaagaggaggcaagaaggactggtggagccgtatgcagaagggggatttcccatgggat
gagaaagacttccagtacctagcgcttggtgcagctggggtctctgccaccattctctat
ttatattttagagacagagggaaggaaatcacctggaaggactttgtccatcgctatttg
gacagaggagtggtggaccgcctggaggtggtcaacaagcagtatgtgcgagtcatctta
gttcccagagcagatgctggagatgggagttacgtatggtttaacataggcagcgtggac
acgtttgaaaggaacctcgagacggctcagcaagagcttggactggaaccttcccacagg
gtagcggtggtctacagctctgagagtgatgggtccttcctcatgagcatcattcccacg
ctgctattgattggctttctgctcttcactcttcgccgggggacaatgggagcaggaggt
ggcgggaagggtgggctgttcagcatgagccagtccaacgccaaaatgatgaaggacaac
attgaagtcaaattcaaggatgtggcaggatgtgaggaggctaagttggagatccttgag
tttgtcaacttcctgaagaaccctcagcaatacaaggatctgggggccaaaatcccaaag
ggtgcggtgctgtctggcccaccaggcactgggaagactctgctggccaaagctacagca
ggagaagccaacgtccctttcatcacagtcaacggctccgagtttctagagatgtttgtg
ggggttgggccagccagggtaagggacatgtttaccatggctcgtaagaatgccccctgc
atcctcttcattgatgagattgatgcggttggcaggaagagaggtggcgggaactttggt
gggcagagtgaacaggaaaacaccctcaaccagctgctagtggagatggatgggttcaac
accagcaccaacgtggtggttcttgctgggaccaacagaccagacatcctggaccctgca
ctgatgaggcctggcagatttgacaggcagatttatattggtccacctgacatcaagggc
cgggcgtccatcttcaaggttcacctgaggcctctgaaactagaccccagcatggacaaa
gatgccctggccaggaaaatggcagcatccactcctggttttactggagctgatattgcc
aatgtgtgtaatgaagctgctttgattgctgcccggtatctgcacgagtccgtcaatgca
aagcactttgagcaagctatcgacagggtgattggaggtttggagaagaaaactcaggtc
ctgcagcccacagagaagaggactgtggcgttccatgaggctggccatgctgtagtgggc
tggttcctggaacatgctgaccccttactgaaggtgtccattattccccgggggaaggga
ttgggttacgcacagtacttgcctaaggagcagtatctgtacacgcgcgagcaactgctg
gacagaatgtgcatgatgctgggcggccgcgtggcggagcaggtgttcttcggacggatc
accacgggagctcaggacgacctgaagaaggtcacacagtccgcctacgctcagatagtg
cagtttggcatgagtgacaaggtgggccaggtgtcgtttgacctccctcgacagggggag
gtggtcatggagaagccctacagtgaggccacagctgagctcatagaccaggaggtacga
gacctggtggaccgggcctaccagcggaccatggagctcgtcctggacaagaaggacgtg
gtggagaaggtggggaagaggctcttggagaaggaggtgctggacaaggccgacatgctg
gagctgcttgggccacgcccgttcgaggaacgctccacctacgaggagtttgttgaaggg
actggcagcttcgaggaggacaccagcctccccgagggcctgaaggactggaacaaggag
cgcagcgtagtccaggaagaggagcccagcaaggagaagcaagtggcttag
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