Clupea harengus (Atlantic herring): 105895650
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Entry
105895650 CDS
T09045
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105895650 (arhgef10)
03036 Chromosome and associated proteins [BR:
char03036
]
105895650 (arhgef10)
Membrane trafficking [BR:
char04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105895650 (arhgef10)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105895650 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ARM_At3g06530
Motif
Other DBs
NCBI-GeneID:
105895650
NCBI-ProteinID:
XP_031436612
Ensembl:
ENSCHAG00000021784
UniProt:
A0A6P8GMC1
LinkDB
All DBs
Position
14:complement(22238439..22290464)
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AA seq
1458 aa
AA seq
DB search
MDVEDFPPPPPEMLAEGMAFNDEDEGERFEFDDSGDDIPEADRPPPAPPAPDYAEQGMLG
GECPPPPGAVAPLPASPHPNPTPEASPAPTTTTTTTTDAAFPPPPPDESCEAPSTVTTNP
TSTPTSAAPEAQLPPPHQEEPPPPSVPAPETDLPPPPEDAAAAAAAAPDPGQKDEGMSSQ
APGPPPAAPRSTSQGKVNPYSVIDITPFQPQLQPQLSAPASSPSSATEKEPEAQEMPSSP
SVPPGYSVPVPCGYAVPSNVPMITPAYTTPVIIRHLSVDEDVTVVGTGNTAGDGVFTEEY
PVIREEDALTKWVSDPANTAWMENPDEVIYDDVPRENSDSTDPDEMIYDDVELGDGGSSL
GDGWSSSEFESYEEQSDGEGHGENGLPDAFVRRKTPSQRTHLSQDLTRLKEHYERKMRDL
MANAVGTVELQQLRQKHEQKVQKLVKAAKDGTKDGLEKTKAAVKKGKSFMRTKSFCSERK
STCFDEEEADMFIDVDCLSVEPVLGPAPEGLSQQQVVRRCILGSILESEKNYIAALKRIL
EQYEKPLSDIEPKLLSDRKRKMMFHRVREILQCHALFQIALASRMAEWDSLEMIGDVFVA
SFSKSMVLDAYREYVNNFSTAMAVVRKACATKPNFLEFLKHRQEISADRVTLYGLMMKPI
QRFPQFILLLQDMLKNTPVGHPDRLPLQMALTELETLAEKLNEKKREADQRCEIKHIGKA
MNERYLNKLLMSGCRYLIRSDDMVETVYNDRGEIIKTKERRLFLLNDVLMCATPNARSPQ
EGGGAPTSGQKFLLKWSVPLSFVEVLEYGSSEEMGDSGRFPAPHSGEKVVINAKPNKLYM
GPGQLYQDLQNLIHDLSLVNQISHMIGSLKGNYQNVNPTVAHDWVSGLQRLIRKKEEEIR
AADRCRIQLQLPGKQDKAGKPTHFTAVFNTFGPAVKQSWISNLQMAKLALEEDNLQGWFF
AEDDGNQIKKQKHPLLLKQMPVVMSKLQEFKVECAVHNPEPHVNSESTADMPALGHGFVW
VASCTNQMGQISIVAMQNSSPKVTECFNVESRILCMAYVPTEEGLANGVGGSDGDPQPGK
NTHTPTICLGMEEGSISVYKSSQRSKKVRLQHFFTPDKSTVTCLVYRSQYLYAGLVSGSV
AIYSRAPDGSWNSTSPKVLKLGVLPVKALIAVEDHVWASSGGQVFIVGTQTHAVERQLEA
HQEEGMVVSHMVVAGVGIWIAFSSGSTLRLFHTETLEHLQDINIATPVNSILSGHQRVSV
SSLLVCHSLLLVGTNLGVIVALSVPRLQGIPKVTGRGMVSFHAHNSPVKFLTMAAAVCNL
PQGSLAGSPPSQPAAPEGERPPCSSGPAPNCVQDQQVVCTGDAGSPSAPIAEDALSCGSL
ALSQGSLEHGPEDSAIYEQLNDPAYTQKSKRSQKVDVSSLLVVSGGLGHRRVNRKTKQSR
HEETMSTIMVWQIPLANV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaagacttccctccacctcctcctgaaatgttagcggagggcatggcgttc
aatgacgaagatgagggtgagcggttcgagtttgacgacagtggggacgacatcccggag
gccgaccgccctccccccgcccctccggcccctgattacgccgagcagggcatgctggga
ggtgagtgtcctcctccaccaggggccgtggctcccctccctgcttcgcctcacccaaac
cccactcctgaggccagcccagccccaacaacaaccaccaccaccaccacagatgcagct
tttcctcctccgcccccagacgagagctgtgaggcccccagcaccgtaaccactaacccc
acctctacccctacatctgctgctccggaggctcaattaccccctccccatcaggaggag
cctccaccccccagtgttcctgccccagagactgacttacctccacccccagaggatgct
gctgctgctgctgctgctgctccagaccctggacagaaagatgaaggaatgtccagccag
gcccccggccctccccccgcggcacccaggagcacctcccaggggaaggttaacccctac
tcggtgatcgacatcacccccttccaaccgcagctgcagccgcagctctcagcgcccgcc
tcttccccttcgtccgccactgagaaggagccggaggcccaggagatgcccagcagcccc
agcgtgccgcctggttactctgtgccagtgccctgtggctacgccgtgccctcgaacgtg
cccatgatcacgccagcctacaccaccccagtcatcatcagacacctctctgtggatgag
gatgtcacagtggtgggcacaggaaatactgctggtgatggcgtcttcactgaagagtat
ccagtcatcagagaggaagatgctttgactaaatgggtgtctgatcctgcaaacactgct
tggatggaaaatccagatgaggtgatttacgatgacgtcccccgagagaactcggactct
acagaccctgatgagatgatttacgatgacgtggaactgggggacgggggcagttcgcta
ggggatggctggagttccagcgagttcgagagctacgaggagcagagcgacggcgagggc
catggcgagaacggcctccccgacgccttcgtccgcaggaagacacccagccagaggacc
catctctctcaagatctgactcgcttgaaagaacactatgagagaaagatgagagatctc
atggcaaatgccgtggggactgtagagctccagcagctcagacagaaacacgagcagaag
gtccagaagctggtgaaggctgccaaagatggcaccaaagatggcctggagaaaaccaaa
gcagctgtgaagaagggcaaatcctttatgagaaccaaatccttctgctccgagcggaag
tccacctgtttcgacgaggaggaagcggacatgttcattgatgtggactgcctgagtgtg
gagccagtgctgggtcctgccccagagggtctctcgcaacaacaggtggtgaggaggtgt
attcttggatcaatattagaaagtgagaagaattatattgctgcactgaagcgcatatta
gagcaatatgagaagcccctctctgacattgaacccaagttgctaagtgaccggaagcgg
aagatgatgttccatcgcgtgcgtgagatccttcagtgccacgccctcttccaaatcgcc
ctggccagcaggatggctgagtgggacagcctggagatgatcggagacgtgtttgtggcc
tccttctccaaatctatggtgttagacgcctaccgggaatatgtgaataatttcagcacg
gccatggcagtggttaggaaagcctgcgccaccaagcctaacttcctggagtttctcaag
caccgccaggagatcagcgctgaccgcgtcactctctacggcctcatgatgaaacccatc
cagaggttccctcagttcatcctcctgctgcaggatatgctgaaaaacacgccggtgggt
caccctgaccgcctccctctgcagatggccttgactgaacttgagactcttgctgagaaa
ctcaatgagaagaaaagagaggccgaccagcgctgcgagatcaaacacatcggcaaggcc
atgaatgagcgctacctcaacaagctgttaatgagcggctgcagatacctgatccgctcg
gatgacatggtggagacggtgtacaacgaccgcggggagatcatcaagaccaaggagcgc
cggctcttcctcctcaacgatgtgctcatgtgtgccacacccaacgcacggtcacctcag
gagggtggaggtgctcccacctcgggccagaagttcctgctgaagtggagcgtcccgctg
agctttgtggaggtgctggagtacggctccagcgaggagatgggcgacagcggccgcttc
cctgcaccccactccggagagaaggtggtcatcaatgccaagccaaataaactctacatg
ggtccaggacagctgtatcaagatctgcagaacctgatccacgacctcagcctagtcaac
cagatctctcatatgattggcagcctaaagggcaactaccagaatgtgaaccctactgta
gcccatgactgggtctctggcctccagcgcctgatccggaagaaagaggaagagatccga
gcagccgaccgctgccgaatacagctgcagttacccgggaaacaggacaaggctgggaaa
cccacacatttcaccgcagtcttcaacacgttcggccccgctgtcaagcagtcatggatc
agtaacctgcagatggctaaactggccttggaggaggataacctgcaaggctggtttttc
gcagaagatgatggaaaccagatcaaaaagcagaagcatcccctcttgctgaagcagatg
cctgtagttatgtccaaactgcaggagttcaaggtggagtgtgcggtgcacaacccagaa
cctcacgtgaacagtgagagcacagctgacatgcctgccctgggccacggctttgtgtgg
gtggccagctgcaccaatcagatgggccagatctccatcgtggccatgcagaactccagc
cccaaggtgaccgagtgcttcaacgtagagtcgcgcatcctctgcatggcctacgtgccc
acggaggaaggcctggcaaacggggtgggaggctctgacggtgaccctcagccagggaag
aacacccacacacccaccatctgcctggggatggaggaagggagcatctctgtttacaaa
agcagccagcggtccaagaaggtccgtctacagcatttcttcacgcctgacaaatccact
gttacgtgcctggtgtacaggagtcagtatctgtacgcgggcctcgtcagcggatcagtg
gccatctactccagagcaccagatggatcttggaactcgacctcccccaaggtgctgaag
ctcggggtgcttcctgtcaaagctctgattgctgtggaggatcacgtgtgggcctcatcg
ggcgggcaggttttcatcgtgggcacccagacccatgcagtggagcgtcaactggaggcc
caccaggaggagggcatggtggtgtcccacatggtggtggccggcgtgggcatctggatc
gccttcagctcgggctccaccctgcgcctcttccacacggagaccctggagcacctgcag
gacatcaacatcgccacccccgtcaacagcatcctctcagggcaccagagggtttctgtg
agcagcctacttgtgtgtcatagtctgctactcgtggggaccaacctgggtgtgatcgta
gctctgtctgtccctcgactccaaggaatccccaaagtcacaggcaggggcatggtgtct
ttccacgctcacaacagtccagtcaaattcctcaccatggcagcagcagtgtgcaaccta
ccacaaggcagccttgccggcagcccacccagtcagccggcggcccccgagggggagagg
cccccctgttcatctggcccagccccaaactgcgtccaggaccagcaagtcgtctgcaca
ggtgacgccggcagcccctcagcccccatcgccgaagatgctctatcctgcggctcgctg
gctttatcccaggggtccctcgaacacggccctgaggacagcgccatctacgaacagctc
aatgaccctgcctacacacagaagagcaagcgcagccagaaggtggacgtgagctctctg
ctcgtcgtctcagggggcctgggtcaccgccgggtgaacaggaagaccaaacagtcgcga
cacgaggaaaccatgtccacaattatggtgtggcagattcctctggcgaatgtgtga
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