Clupea harengus (Atlantic herring): 105895689
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Entry
105895689 CDS
T09045
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04218
Cellular senescence
char04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105895689
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105895689
04217 Necroptosis
105895689
04218 Cellular senescence
105895689
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105895689
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105895689
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
105895689
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
105895689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
EF-hand_6
EF-hand_5
HEXIM
Motif
Other DBs
NCBI-GeneID:
105895689
NCBI-ProteinID:
XP_031436807
UniProt:
A0A6P8GMZ8
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Position
14:complement(26071074..26081007)
Genome browser
AA seq
670 aa
AA seq
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MPPPGVCLNIMNERNKKNGRGSTTNPDKFLDQDFEQLQKYCTINRKRYIDDMFPPDRRSI
GNGVLEPDELARVVWRRPRKLVENPCFILDGLSRFDFGQGAIGNCWFLASIGALTFQKHI
REQIIPVDQSFQEGEGYVGLFHFRFWRFGKWVDVVIDDKLPTIDGRLIFVRSKTPNEFWA
ALMEKAYAKVCGSYADMNAGTVSEALKDFTGGIYRTFKLDEAPPDLWDIILRAAQSKSLM
GCGTPQGATSANTVLPNGIVQGHAYTITGVTKLMTNNQSVKLVRLFNPHGHGEWNGNWSD
KSNSWQSVSPEDRTKCLSITDDGEFWMSMEDFCSSYSDMDICCLCPDFLDGSSECHWTSK
FHDGRWVAGTTAGGCMNYRESFWTNPQYHIKLDAVDDECASEQGPNNMLVSLMQKPDKRN
RQLVSNLHIGFSVFSVPPEYKGKRGKLPAEFFMRNPVASTKNYMNAREVMEFFRLVPGEY
IIVPSTFKPNETASFILAILSKSDSHLEESSSHHVEITKPTPTENGGDTDSKATLFRQYS
DQYEEVDAEQLQNLLNENLLQGKSPGFGLDTCRSMVALMDLTVTGRLDAREFLRLWDRVV
SYKELFNRADMTKNGVLSLGELQNAMIATGIQMSDGMLNLMALRYGGSTGSLTLETFVSL
ILRLECMSSK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctggtgtgtgtctgaatattatgaatgaacgcaataagaaaaatggcaga
ggatctaccaccaaccctgacaagttcctggatcaagacttcgaacagctgcagaaatac
tgcaccattaatcgcaagaggtacatcgatgacatgtttccaccagatcgtaggtccatt
ggcaacggagtactggagcctgatgagctggccagagttgtgtggcgaagaccacggaaa
ctggtggaaaacccttgtttcattttggacggtttatcaaggtttgactttggacaagga
gctattggaaactgttggttcctggcttctattggagcgctgacctttcagaagcacatt
agggagcagatcatccctgtggatcagtcttttcaggagggggagggctatgtaggctta
tttcacttcaggttctggagatttgggaagtgggtagatgtggtgattgacgacaagctt
ccaacaattgatgggaggctgatatttgtgcgctcgaaaacccccaatgagttttgggct
gcactgatggagaaggcctatgccaaggtatgtggctcctatgctgacatgaatgctggc
actgtgtcagaggccctgaaggacttcacaggggggatctacaggacattcaagctggat
gaagccccccctgacctgtgggacatcattttgagggctgcccagtccaaatccctcatg
ggctgtggcactcctcaaggagcaacatctgccaacactgttttaccaaacgggattgtg
cagggccatgcctacaccatcacaggagtaactaagctaatgaccaacaatcagtctgtg
aaactggtgagattgttcaacccccatggacacggagagtggaatggtaattggagtgat
aaatcaaacagttggcaatctgtgagcccagaggacagaacaaagtgcctctcaatcact
gatgatggcgagttctggatgtcaatggaagatttctgtagcagctattctgatatggat
atctgctgtttgtgccctgatttcctcgatgggtcctctgagtgccactggacctccaaa
ttccacgacggccgatgggtcgctggaaccactgctggcggctgcatgaattacagagag
agtttctggacaaatcctcaatatcacatcaagctggatgccgtggatgatgagtgcgct
tcggagcagggaccaaacaacatgctggtgtctctcatgcagaagcctgacaagaggaac
aggcagctggtttccaaccttcacattggcttctcagttttcagcgtgcctcctgagtac
aaagggaaacgagggaagttacctgcagagttcttcatgaggaaccctgtggcttcaacc
aaaaactacatgaatgctcgagaagtcatggagttcttcagactggtcccgggcgagtac
atcattgtcccctctactttcaagcccaatgagacggcttccttcatcctggccatactc
tccaagtcagacagccaccttgaggaaagttcctctcatcatgtggagattactaagccc
actccaactgaaaacggaggtgatactgactccaaagcaaccttgttccgacagtactcg
gatcagtacgaggaggtagatgctgagcaactccagaaccttctgaatgagaaccttctc
caaggcaagtcaccgggctttggcctagatacctgccgcagtatggtggccttgatggat
ctcacggtcacaggccgtctggatgcccgtgagttccttcgactgtgggaccgagttgtc
tcctacaaagaactttttaatcgtgctgatatgacaaaaaatggtgtcctctccctgggt
gaactgcagaatgctatgattgccacaggtatacagatgagcgatggcatgctaaacctc
atggctctccgctacggtggctcaacgggaagcctgacgctggagacctttgtgtcactc
atcctgcgcttggagtgcatgtccagtaagtag
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