KEGG   Clupea harengus (Atlantic herring): 105895689
Entry
105895689         CDS       T09045                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04141  Protein processing in endoplasmic reticulum
char04210  Apoptosis
char04217  Necroptosis
char04218  Cellular senescence
char04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105895689
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    105895689
   04217 Necroptosis
    105895689
   04218 Cellular senescence
    105895689
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105895689
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:char01002]
    105895689
Enzymes [BR:char01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     105895689
Peptidases and inhibitors [BR:char01002]
 Cysteine peptidases
  Family C2: calpain family
   105895689
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_1 EF-hand_6 EF-hand_5 HEXIM
Other DBs
NCBI-GeneID: 105895689
NCBI-ProteinID: XP_031436807
UniProt: A0A6P8GMZ8
LinkDB
Position
14:complement(26071074..26081007)
AA seq 670 aa
MPPPGVCLNIMNERNKKNGRGSTTNPDKFLDQDFEQLQKYCTINRKRYIDDMFPPDRRSI
GNGVLEPDELARVVWRRPRKLVENPCFILDGLSRFDFGQGAIGNCWFLASIGALTFQKHI
REQIIPVDQSFQEGEGYVGLFHFRFWRFGKWVDVVIDDKLPTIDGRLIFVRSKTPNEFWA
ALMEKAYAKVCGSYADMNAGTVSEALKDFTGGIYRTFKLDEAPPDLWDIILRAAQSKSLM
GCGTPQGATSANTVLPNGIVQGHAYTITGVTKLMTNNQSVKLVRLFNPHGHGEWNGNWSD
KSNSWQSVSPEDRTKCLSITDDGEFWMSMEDFCSSYSDMDICCLCPDFLDGSSECHWTSK
FHDGRWVAGTTAGGCMNYRESFWTNPQYHIKLDAVDDECASEQGPNNMLVSLMQKPDKRN
RQLVSNLHIGFSVFSVPPEYKGKRGKLPAEFFMRNPVASTKNYMNAREVMEFFRLVPGEY
IIVPSTFKPNETASFILAILSKSDSHLEESSSHHVEITKPTPTENGGDTDSKATLFRQYS
DQYEEVDAEQLQNLLNENLLQGKSPGFGLDTCRSMVALMDLTVTGRLDAREFLRLWDRVV
SYKELFNRADMTKNGVLSLGELQNAMIATGIQMSDGMLNLMALRYGGSTGSLTLETFVSL
ILRLECMSSK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcctcctcctggtgtgtgtctgaatattatgaatgaacgcaataagaaaaatggcaga
ggatctaccaccaaccctgacaagttcctggatcaagacttcgaacagctgcagaaatac
tgcaccattaatcgcaagaggtacatcgatgacatgtttccaccagatcgtaggtccatt
ggcaacggagtactggagcctgatgagctggccagagttgtgtggcgaagaccacggaaa
ctggtggaaaacccttgtttcattttggacggtttatcaaggtttgactttggacaagga
gctattggaaactgttggttcctggcttctattggagcgctgacctttcagaagcacatt
agggagcagatcatccctgtggatcagtcttttcaggagggggagggctatgtaggctta
tttcacttcaggttctggagatttgggaagtgggtagatgtggtgattgacgacaagctt
ccaacaattgatgggaggctgatatttgtgcgctcgaaaacccccaatgagttttgggct
gcactgatggagaaggcctatgccaaggtatgtggctcctatgctgacatgaatgctggc
actgtgtcagaggccctgaaggacttcacaggggggatctacaggacattcaagctggat
gaagccccccctgacctgtgggacatcattttgagggctgcccagtccaaatccctcatg
ggctgtggcactcctcaaggagcaacatctgccaacactgttttaccaaacgggattgtg
cagggccatgcctacaccatcacaggagtaactaagctaatgaccaacaatcagtctgtg
aaactggtgagattgttcaacccccatggacacggagagtggaatggtaattggagtgat
aaatcaaacagttggcaatctgtgagcccagaggacagaacaaagtgcctctcaatcact
gatgatggcgagttctggatgtcaatggaagatttctgtagcagctattctgatatggat
atctgctgtttgtgccctgatttcctcgatgggtcctctgagtgccactggacctccaaa
ttccacgacggccgatgggtcgctggaaccactgctggcggctgcatgaattacagagag
agtttctggacaaatcctcaatatcacatcaagctggatgccgtggatgatgagtgcgct
tcggagcagggaccaaacaacatgctggtgtctctcatgcagaagcctgacaagaggaac
aggcagctggtttccaaccttcacattggcttctcagttttcagcgtgcctcctgagtac
aaagggaaacgagggaagttacctgcagagttcttcatgaggaaccctgtggcttcaacc
aaaaactacatgaatgctcgagaagtcatggagttcttcagactggtcccgggcgagtac
atcattgtcccctctactttcaagcccaatgagacggcttccttcatcctggccatactc
tccaagtcagacagccaccttgaggaaagttcctctcatcatgtggagattactaagccc
actccaactgaaaacggaggtgatactgactccaaagcaaccttgttccgacagtactcg
gatcagtacgaggaggtagatgctgagcaactccagaaccttctgaatgagaaccttctc
caaggcaagtcaccgggctttggcctagatacctgccgcagtatggtggccttgatggat
ctcacggtcacaggccgtctggatgcccgtgagttccttcgactgtgggaccgagttgtc
tcctacaaagaactttttaatcgtgctgatatgacaaaaaatggtgtcctctccctgggt
gaactgcagaatgctatgattgccacaggtatacagatgagcgatggcatgctaaacctc
atggctctccgctacggtggctcaacgggaagcctgacgctggagacctttgtgtcactc
atcctgcgcttggagtgcatgtccagtaagtag

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