Clupea harengus (Atlantic herring): 105895789 Help Entry 105895789         CDS       T09045                                  Symbol xpo1a Name (RefSeq) exportin-1 isoform X1   KO K14290   exportin-1 Organism char  Clupea harengus (Atlantic herring) Pathway char03008   Ribosome biogenesis in eukaryotes char03013   Nucleocytoplasmic transport char03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     105895789 (xpo1a)    03008 Ribosome biogenesis in eukaryotes     105895789 (xpo1a)   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     105895789 (xpo1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:char03019]     105895789 (xpo1a)    03009 Ribosome biogenesis [BR:char03009]     105895789 (xpo1a)    03016 Transfer RNA biogenesis [BR:char03016]     105895789 (xpo1a)    03036 Chromosome and associated proteins [BR:char03036]     105895789 (xpo1a) Messenger RNA biogenesis [BR:char03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      105895789 (xpo1a) Ribosome biogenesis [BR:char03009]  Eukaryotic type   Pre-40S particles    Export and cytoplasmic maturation factors     105895789 (xpo1a)   Pre-60S particles     105895789 (xpo1a) Transfer RNA biogenesis [BR:char03016]  Eukaryotic type   tRNA transport factors    tRNA export factors     105895789 (xpo1a) Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Centrosome formation proteins    Centrosome duplication proteins     Regulators of centriole replication      105895789 (xpo1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v Motif Other DBs NCBI-GeneID:  105895789 NCBI-ProteinID:  XP_031417746 Ensembl:  ENSCHAG00000008476 UniProt:  A0A6P8F0F2 LinkDB All DBs Position 24:complement(9459158..9477821) Genome browser AA seq 1070 aa AA seqDB search MPAEMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGTQQRMAQEVLTNLKDHPDAW TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATSV EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFSLTMMQLKQMLPL NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSHSFDVPPRRHLYLPVLSKVRTLM VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEE YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL LQNVTQEEAAAQSFYQTYFCDILQHILSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV ALNASAVSNQVYVQEYVANLLKTAFPHLQDAQVKIFVTGLFSLNQDIPAFKEHLRDFLVQ IKEFAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHELPEEMCD NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgccagcagagatgacaatgttagcggaccatacagcacgtcagctgctggacttcagt cagaagctagacatcaacttacttgacaatgtggtcaactcgatgtactacgatgtgggg acacagcagagaatggcacaggaagtccttaccaatctgaaagaccatcccgatgcttgg acaagagtggacaccattcttgagttctcacagaacatgaagactaagtattatgcactt cagattctggagactgtgatcaaaactcgctggaaaatcctaccccgaaaccagtgtgaa ggtattaagaagtacgtggttgggctcatcatcaagacgtcctctgatgccacaagtgta gagaaggagggagtgtacatcgccaagttgaacatgatccttgtccagatcctgaagcag gagtggcctaagcactggcccacgttcatcagcgacatcgtgggggcgagccgcaccagc gagagcctgtgccagaacaacatgatcatcctcaagctgctcagcgaggaggtgttcgac ttctccagcggacagatgactcaggtcaaagccaagcacctgaaggacagcatgtgtaac gaattctcccaaatattccagctttgccaatttgtcatggagaactcccagaatgcaccg ctggtccacgccaccctggagacgctgctgcgcttcctcaactggattccactgggctat attttcgagaccaaactcatcagcacactggtgtacaagtttttgaacgtgccgatgttc cggaatgtgacgttgaagtgcttgactgaaattgctggcgtcagtgtgaaccagtacgag gagcagttcgtcaaccttttcagtctgactatgatgcagctcaaacagatgcttccactg aacaccaacatcagggtggcgtacgcgaacggcaaggacgacgagcagaacttcatccag aacctgagcctgttcctgtgcaccttcctcaaggagcacggccagctcatcgagaagagg cccaacctgagagagacgctcatggaggccctgcactacatgctgctggtgtctgaggtg gaggagacggagatcttcaagatctgcctggagtactggaaccacctggccgccgagctg taccgcgagagccccttctcgacctccacgtccccgctgctctccggcagccacagcttc gacgtgccgccccgcagacacctctacctgcccgtgctgtccaaggtgcgtacgttgatg gtgagccgcatggccaagcccgaggaggtgctggtggtggagaacgaccagggcgaggtg gtgcgggagttcatgaaggacacggactccatcaacctctacaagaacatgagagagact ctagtgtacctgactcatctggactacgccgacacggaacgcatcatgaccgagaagctg cacaaccaggtgaacggaaccgagtggtcgtggcggaacctgaacacgctctgttgggcc atcggttccatcagtggagccatgcacgaggaggacgagaagaggttcctcgtcacagtc atcaaggacctactgggcttgtgtgaacagaagagggggaaggacaacaaagccatcatc gcctccaacatcatgtacatcgtaggccagtacccacgattcctgcgggctcactggaag ttcctcaagaccgtcgtcaacaagctcttcgagttcatgcacgagacccatgacggcgtg caggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcggcactttgtc caggtgcaggtgggcgaggtgatgcccttcattgacgagatcctcaacaacatcaacaca atcatctgtgacctccagccacagcaggtgcacacgttttacgaggcggtgggctacatg atcggggcgcagacggaccaggccgtgcaggagcacctgatcgagaagtacatgttgcta cccaaccaggtgtgggacagcatcatccagcaggccacaaagaacgtggacatcctgaag gacccggagacggtgcgccagctgggcagcatcctgaagaccaacgtgcgggcctgcaag gccgtgggccaccccttcgtcgtccagctgggccgcatctacctggacatgctcaacgtc tacaagtgcctgagcgagaacatctcctccgccatccagaccaatggtgagatggtgacc aagcagccgctgatccgcagcatgcgcacggtgaagagggagacgctgaagctcatctcc ggctgggtcagccgctccaacgacccgcagatggtgggggagaacttcgtcccaccactg ctggaggctgtcttgattgactaccagcggaacgttccggcagccagagaaccggaagtt ctgagcaccatggcaaccattgtcaacaagctgggagggcacatcactggggagatcccc aagatattcgatgccgtgtttgaatgtaccctaaacatgattaataaggactttgaggag taccccgagcacaggacgcacttcttctacctgctgcaggcggtcaactcccagtgcttc cctgcattcctatccatccctccggcccagttcaagctggtgctggactccatcatctgg gccttcaagcacaccatgcgcaacgtggccgacaccggtctgcagatcctctacacgctc cttcagaacgtcacccaggaagaggctgctgcccagagcttttatcagacctacttctgt gacatcctgcagcacatcctctccgtcgtcacggatacgtctcacacggccggcctgacg atgcacgcgtccatcctggcttacatgttcaacctggtggaggagggcaagatcagcgta gccctcaacgccagcgccgtcagcaaccaggtctacgtgcaggagtatgtggccaacctg ctcaaaacagccttcccccatctgcaagatgcccaggtgaagattttcgtcaccggactc ttcagcctcaatcaggacattcccgctttcaaggagcatctgagggacttcttggtccag atcaaggagtttgcgggcgaggacacaagcgacctgttccttgaggagcgggagtcgtcg ctgaggcaggcccaggaggagaagcacaagctgcagatgtccgtgccaggcatcctcaac ccccacgagctgcccgaggagatgtgtgactga

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