Clupea harengus (Atlantic herring): 105895819
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Entry
105895819 CDS
T09045
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105895819 (pus10)
Enzymes [BR:
char01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
105895819 (pus10)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105895819 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Shisa_N
Motif
Other DBs
NCBI-GeneID:
105895819
NCBI-ProteinID:
XP_012677961
Ensembl:
ENSCHAG00000009421
UniProt:
A0A6P3VQ56
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All DBs
Position
24:9497474..9506899
Genome browser
AA seq
525 aa
AA seq
DB search
MLPLKEKDRPIIQKLLDAGCCGRCILRFCCIGTQSAYRLSNEDLWKDLHAFVSNTEVASQ
TPSDDPPSKRIKLDSDGKADGGETEGVPMVTAEPTADGTESSVCVVCLGVLQDFCNPSFT
KKISEVVKSEEYQFESLVLSVSLPAQLLVREHSCWLHIKKEVREKSMCLDKEDVIQVKEA
FKWTVQSMLSETLGVPAVMKSPFEVAVGFIHPDTDADCHFLAEACSDCFHTSKNKERSVF
TRMAVVKALEKITDKKFLNEYPSPPAGVKTACVAQETTCLHLSTYVAGRYNKFSRTLPQT
PWVIDGERRMESSVEELIAAPLLTAFKCESFNFSSSGREDVDVRTLGNGRPFAMELLNPH
RLKFNKMEVRQLQEEINQSSDKIRIRDLQLVTREAMGHMKEGEEDKTKSYSALIWSQKAI
TEEDIEFIGNIKDLEIAQKTPLRVLHRRPLAVRQRVIHTMSTSHLNPHHFTLQLRTQAGT
YIKEFVHGDFGRTKPNLGELMKTEVDILELDVESVDVDWPPAIPE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctctgaaggagaaggaccggcccatcatccagaagctgctggatgctggctgc
tgtggccgctgtatcctgagattctgctgtattggaacccagtctgcatatcgactgtcc
aatgaggacctatggaaggacctgcatgctttcgtcagcaacacagaagttgcctcccag
acgccttcagatgaccctccctccaaaagaataaagttggattcggacggcaaggcagat
ggaggcgagactgagggggttcccatggtaacagcagaaccgacggcagacggcacagag
tcctctgtatgtgtggtgtgtttgggggtgctacaagacttttgcaaccccagcttcacc
aaaaagatttcagaagttgtgaaatctgaagagtatcaatttgagagcctggtgctatcc
gtgtcacttccggcccagctgttggtcagagagcactcctgctggctccacattaaaaag
gaagtaagagaaaagagcatgtgtctggacaaagaagatgtcatccaagtaaaggaggcc
ttcaaatggaccgtgcagagtatgctgtccgaaacactgggggttcccgcggtgatgaag
agtccatttgaggtggcagttggattcatccacccagacacagatgctgactgccacttt
ctggcagaagcttgctctgactgtttccatacatcgaaaaacaaagagaggtctgttttt
accagaatggctgtggtgaaggccttggagaagataactgataagaaattcctcaacgag
taccctagccctcctgcaggagtaaagactgcatgcgtagctcaagaaacaacatgtctg
cacctgtctacctatgtggctgggcgatacaacaagttctcgcggacgctgccgcagacg
ccgtgggtgatcgacggcgagaggaggatggagtcctcggtggaggagctgattgctgcg
cccctcctgactgccttcaagtgcgagagttttaacttctcctcgtcaggaagggaagat
gtggacgtcaggaccctggggaatgggcggccattcgctatggagctgctgaacccacac
cgattaaaattcaacaaaatggaggtccgccagctacaagaggaaataaaccagtcttca
gataagatccgcatccgagacctccagttggtaaccagagaagcaatgggtcacatgaag
gaaggagaggaagacaagaccaagtcctacagcgccctcatctggagccagaaggccata
accgaagaggacatcgagttcatcggcaacataaaggatctggagattgctcagaagacg
ccactgagggtcctgcaccggaggccactggcggtgcgtcagcgcgtcatccacaccatg
agcaccagccacctaaacccacaccacttcaccctgcagctcaggacacaggctggcaca
tacataaaggagtttgtgcacggagactttggccgcaccaagcccaacctgggggagctc
atgaagacggaggtggacatcctggagctggacgtagagtcagtcgacgtggactggcct
cctgccatcccagaataa
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