Clupea harengus (Atlantic herring): 105895896
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Entry
105895896 CDS
T09045
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00520
Amino sugar and nucleotide sugar metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105895896
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
105895896
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GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
105895896
NCBI-ProteinID:
XP_012678042
Ensembl:
ENSCHAG00000027705
UniProt:
A0A6P3VPV8
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Position
5:23243221..23247240
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AA seq
455 aa
AA seq
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MARLLLLTALGVLFTLQMVSSTKLVCYLTNWSQYRPGAGKFTPANVDPFLCTHVVYTLAT
ISPDNQLATIEWNDEDMYKQLNNLKLTNPNMKTLLSIGGLFNGVSPFVAMVFTAESRNTF
IKSALSFLRTHNFDGLDLAWEFPGQNGSPLDDKQRFTALLTELRQAIMDEARDNKKPPLL
ISIKVGALSSTIDIGYEVPEVASKVDFISIMSYDYHGHWEKRTGHNSPLFNSSLDQGSHV
HHNIESTVTYWLEKGAAADKLLLGFPTYGRTFQLTSSYSGLGAPANGPAEAGPYTREAGF
WSYYEVCSFTSTGTVGWITEQKVPYATHGNSWVGYDNKESYAAKAQWLRGKDLGGASVWT
LDLDDFGGAFCADGAYPLVSHLRNSLGFPPKPTTTVGPTTTADPITTFCRGRPDGLYPNS
ADGNTYFQCFRGNTYLHSCQPGLVFQDSCKCCNWP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacttcttcttctgacagctttgggtgtgctgttcaccctgcagatggtgagc
tccaccaagctggtgtgctacttgaccaactggtcccagtacagaccaggagcgggcaag
ttcactcctgccaacgtggaccctttcctctgcactcatgtggtatacaccctcgccacc
atcagccctgacaaccagcttgccacgattgagtggaatgacgaagatatgtacaaacag
ctgaacaacctgaagctaacgaatcccaacatgaaaactcttctctctattggaggcttg
ttcaacggagtcagtccgtttgttgccatggtgttcacagcagagagccgtaacacattc
atcaagtctgccttgagtttcctgcgaactcataactttgatggcctggacctggcctgg
gagtttcctggacaaaatggcagcccactggacgacaagcagaggttcactgccctgctc
acggagctgagacaggccatcatggatgaggccagggacaacaagaaaccccccctccta
atctcaatcaaagtgggtgctcttagctccacaatcgatatcggttatgaggttcctgaa
gtggcaagcaaagtggacttcatcagcatcatgagctatgactatcacggccactgggag
aagagaaccggacacaacagccctctcttcaacagctctctcgaccagggatctcatgtt
caccacaacattgagtctactgtgacctactggctggagaaaggtgccgcggctgataag
ctgctcttgggtttccccacgtatggtcgcaccttccagctcacctcctcctactcgggc
ctgggtgctcctgcaaacggcccagccgaagccggcccctacacccgcgaggctggcttc
tggtcttactacgaggtttgctccttcacatcaactggcacagtcggctggattacagag
cagaaggttccttatgcaacccacgggaactcctgggtgggctatgacaacaaggagagc
tatgctgcgaaggcccagtggctgagagggaaggacctgggcggggcgtctgtgtggaca
cttgacctggacgactttggaggcgccttctgtgcagatggcgcataccctctggtcagc
cacttgcgtaactcactgggtttcccacccaaacctaccaccactgtgggccccactacc
actgcggaccccatcaccaccttttgccgcggccgccctgatggcctttacccaaactcc
gctgatgggaacacttacttccagtgtttccgtggaaacacctacctgcacagctgccag
cctggcctggtgttccaagattcctgcaagtgctgtaactggccataa
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