KEGG   Clupea harengus (Atlantic herring): 105895944
Entry
105895944         CDS       T09045                                 
Symbol
zc3h11a
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105895944 (zc3h11a)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105895944 (zc3h11a)
SSDB
Motif
Pfam: zf-CCCH_3 zf_CCCH_4
Other DBs
NCBI-GeneID: 105895944
NCBI-ProteinID: XP_031424049
UniProt: A0A6P8FKN7
LinkDB
Position
5:23265303..23273350
AA seq 859 aa
MTNHGDDCYFFYYSTCSKGDSCPFRHCDAAMGSEMVCSLWQENRCFRKVCKFRHMEIQKN
RKEIACYWERQPSGCQKSHCAFHHERARFIDGVFVPPNKGSAVKKGGEEEPTQEEPAPQP
PNPSNPQLRGVIKADTQENVPSPTHPPVVINPIDDEDEDEDDQFSEEGDERSRMSSPRKL
MMGPKDDSLNFGVRTLEEIRLRKALKASLRRAEDAGLTVPSTGEKENMSSILRPALFTAK
NRPEEAGKWRITDRLEKRTLNDDTPVEGELPVKRSLSHRLGGRADGSEDPDQPSQRGAHS
MRERLGLHAESSSTPSPAATSQPGPTGEIRIKTLEEIRQEKAAKSQAQASDSPPKKITKS
FSETLLAKKKQELQKRKVHVVTKPVSKETPEATPVVKPSAPAQPSGGVRVKTLEQIRQEK
AARLEAQAQSPPAQDQSSSSGSEEGGAPNKKRILRIKTPSPASADVKVQKLAELPEKPKD
GGFNETLANGKAVAPAVEKVRPDSSSVKVKTFEEIMQEKQLRRQEQEATQSQATPAAQKQ
PITVTNTTTITTPAPSPPAPVPAPAPARQRITVKPNVAPAVLNAEPLVAASAGPKDLPVS
LVKRPRIAAAPAPAPTPAPAPAPLPVQQIPVSATPQPNTAPETGPLKKSPENKVKPKVNV
KPVVKPSSMKPSSMKPSAHVRPGQKRKAAAGKGSAVAAVKPLSPAAAAEEAAELQEPPCK
RSEVSVPAPPSALEAAATQIPLQGHAISSSAVEGNTQKNDLQTVPVFEQSPATPTSNSSA
ENLMTAPQSPPVPKTPNQTRARKGSTTTPRINTSVTSSTSNVDDFEQLINEFEMDDEVDL
GPDKGEDDLLLELSEMIGS
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgaccaaccacggtgatgactgttacttcttctactactcgacgtgcagcaagggcgac
agctgcccgttcagacactgcgatgccgcaatgggcagcgagatggtgtgcagcctgtgg
caagagaatcgctgcttccgcaaggtctgcaagttccgccacatggagattcagaaaaac
aggaaggagatagcatgctactgggagagacagccatcaggatgccagaagtcccactgc
gcttttcaccatgagagagctcgtttcatagacggagtctttgttcctcccaataaaggc
tcagctgtgaagaaaggcggagaggaggagcctacgcaggaagagccagcccctcagccc
cccaatccttctaacccccagctccgcggtgtcataaaagctgacacgcaggagaacgtg
cccagccccacccatccaccagtggtcattaaccctattgatgacgaagacgaagatgag
gacgatcagttctcagaggaaggagatgagcggtccagaatgtcctctccaaggaaactg
atgatgggccccaaagacgattccttgaactttggtgtgcggacgctggaggagatccgg
ctgcgcaaagccctaaaggccagtctaaggagagcagaggatgcagggcttacagtacca
agcactggagagaaggagaacatgagctccatccttcgcccagcacttttcaccgccaag
aaccgtcctgaagaagcaggaaagtggagaatcacggatcgacttgagaaaagaacactt
aacgatgacacgcctgtggagggggagctgcctgtgaagcgcagcctgtcccatcgcctg
ggtgggagggcggatggatcagaggatccagaccaaccctctcagcggggtgcacattca
atgcgggagagactgggcctgcatgcagagtccagcagcactcccagccctgcagccact
agccagccgggccctactggagagattcgtattaagacgttggaggagattcggcaggag
aaggccgccaagtcccaggcacaggcctccgacagccctcccaagaagatcacgaagagc
ttctccgagaccctccttgccaagaaaaagcaggagctgcagaagaggaaggtgcatgtg
gtgaccaaacctgtgagtaaagagactccagaggccacacccgttgtcaaaccctccgct
ccggcccagccaagcggcggggtgcgggtgaagaccctggagcagatccggcaggagaag
gcagccagactggaagcccaggcccagagccctcctgcccaggaccagagctcatcgtcg
gggtctgaagaaggaggagcccctaacaagaagcgaatcctgcgtatcaaaacaccttca
cctgcatcagctgatgtcaaagtgcagaaacttgctgagctgcctgagaagcccaaagat
ggtggatttaatgagacgttggccaatgggaaagctgtggctcctgctgttgagaaggtg
cggccagactccagctcggtgaaggttaagacatttgaggagatcatgcaggagaagcag
ctgcgcaggcaggaacaggaagccacccagtcccaggccacaccagctgcccagaagcag
cccatcacggtgaccaacaccaccaccatcaccaccccggcgcccagcccgcccgctcct
gtccctgcccctgcccctgcccgccagcgcatcactgtaaagcccaatgtggcccctgcc
gtcctcaatgctgagccccttgtcgctgcaagcgcaggtcccaaagacctgcctgtgagc
ttggtgaaaaggcctaggatcgctgcagctcctgctccagcccccacccctgccccggcc
cccgcccctttgccggtccagcagatccctgtctcagcaacgccgcaaccaaacacagcc
ccagagaccggcccactgaagaagtcccctgagaataaagtgaaacccaaggtaaatgtg
aagccagtggtgaagccatcctctatgaagccatcctctatgaagccgtctgcacacgtg
cggccgggccagaagaggaaggcggcggccggcaaggggtcagctgttgccgcggtaaaa
cccttgagcccggctgctgccgctgaagaagccgccgagctgcaggagccgccctgcaaa
cgctctgaggtgtctgtacccgctcctccatctgcgttagaagcagcggccacccagatt
cccctccagggccatgccatcagcagctctgctgtcgagggtaacacacagaaaaacgac
ctccagactgtgcctgtgtttgagcagagcccggccacacccacatccaacagctcagcg
gagaacctcatgactgcccctcagagccctcctgtgccgaagaccccaaaccagacgagg
gcacgcaagggaagcaccaccactccccgcatcaacacctctgttacgtccagcacctct
aatgtggatgactttgaacagctgatcaatgagtttgagatggacgatgaagtcgatctg
gggcctgacaagggggaggatgaccttctcctagaattgtcggagatgattggtagctga

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