Clupea harengus (Atlantic herring): 105895946
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Entry
105895946 CDS
T09045
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105895946 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895946 (snrpe)
03041 Spliceosome [BR:
char03041
]
105895946 (snrpe)
03032 DNA replication proteins [BR:
char03032
]
105895946 (snrpe)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105895946 (snrpe)
Spliceosome [BR:
char03041
]
Complex A
U1 snRNP components
Sm proteins
105895946 (snrpe)
U2 snRNP components
105895946 (snrpe)
Complex B
U1 snRNP components
105895946 (snrpe)
U4/U6.U5 tri-snRNP components
105895946 (snrpe)
Complex C
U2 snRNP components
105895946 (snrpe)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105895946 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
105895946
NCBI-ProteinID:
XP_031424061
Ensembl:
ENSCHAG00000000758
UniProt:
A0A6P8FK88
LinkDB
All DBs
Position
5:23274042..23277044
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AA seq
94 aa
AA seq
DB search
MAYRGQGQKIQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRVMLKGDNITLLQSVAAVP
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccggggacaaggacagaagatccagaaggttatggtccagcctattaatcta
attttcaggtatcttcaaaatcggtcccgtattcaggtctggctctatgaacaggtcaac
atgcggatagaaggatgtatcattggctttgatgaatacatgaacctggttctggatgat
gcagaggaggtccacatgaaaaccaagaacaggaagcccctgggtcgggtcatgctgaaa
ggagacaacattaccctactacagagtgtggccgccgtcccctaa
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integrated database retrieval system
