Clupea harengus (Atlantic herring): 105895947
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Entry
105895947 CDS
T09045
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105895947 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895947 (wdr82)
03036 Chromosome and associated proteins [BR:
char03036
]
105895947 (wdr82)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105895947 (wdr82)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105895947 (wdr82)
COMPASS/SET1 complex (yeast)
105895947 (wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_WDR35_TULP_N
KNTC1_N
Beta-prop_HPS5
VPS8_N
MinC_C
RMC1_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
105895947
NCBI-ProteinID:
XP_031424159
Ensembl:
ENSCHAG00000022046
UniProt:
A0A6P8FEW2
LinkDB
All DBs
Position
5:complement(26111388..26115546)
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLPYERTCEWTGLKFSNDGKLILVSTNGGTLRLMDAFKGAVLHSFGGYNNSKA
VILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacggacaatgtgttgcggagcttcagggtagctaaggtgtttcgagagaat
tcggacaaaatcaactgttttgacttcagttcgaatggggagacggtgatttcgagcagc
gatgatgactctatagtcttatatgactgccaggagggaaaaccaaagcgaacgttgtac
agcaagaagtatggagtggacctcatcagatacacacacgcagccaacaccgtcgtctac
agctccaacaaaattgatgacactattcggtatctgtcgctacatgacaacaagtacatt
cggtacttccctggacacaacaagagggtggtggcgctctccatgtcacctgtggatgac
accttcatctccggctcgctggataaaaccattcgactctgggacctccgctccccaaac
tgccagggcttgatgcacctacagggaaagccggtgtgctcgttcgatccagagggtttg
atcttcgcagcgggggtcaactctgagatggttaagctttatgacctgcgctcatttgac
aagggtccatttgccacgtttaagttgccctatgagcgcacgtgtgagtggaccggcctg
aagttcagtaatgacgggaagctgatcctggtctcgaccaatgggggaaccctgcgcctc
atggatgccttcaagggggctgttcttcattcttttgggggctacaacaacagcaaagcg
gtgattctggaggcttcgtttactcccgactctcagtttataatgatcggctctgaggat
gggaagatccacgtttggaatgcagagagtgggatgaaggtggcgttgctagacggcaaa
cacacgggacccgtcacgtgtctacagttcaaccccaagttcatgaccttcgctagtgcc
tgctccaacatggctttctggttacccaccatcgatgattga
DBGET
integrated database retrieval system