Clupea harengus (Atlantic herring): 105895965
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Entry
105895965 CDS
T09045
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105895965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105895965
03012 Translation factors [BR:
char03012
]
105895965
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105895965
mRNA cycle factors
Stress granule specific factors
105895965
Translation factors [BR:
char03012
]
Eukaryotic type
Initiation factors
eIF-4
105895965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
105895965
NCBI-ProteinID:
XP_031424113
Ensembl:
ENSCHAG00000017072
UniProt:
A0A6P8F6I0
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All DBs
Position
5:25001289..25010571
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AA seq
643 aa
AA seq
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MAASAKKKNKKGKTLTLTDFLADDKGNAMPAPSFSSAKATSWADETDDLDGDVSTSWHTA
EDVFRGPPIDRSILPTAPRAAREPNVDRSRLPKSPPYTAFLGNLPYDVSEESIKDFFRGL
AISAVRLPREPSNPERLKGFGYAEFDDVESLLNALTFNEENLGNRRVRVDIADQSNDKER
DNGSMMGRDRDRGHGLEDGPANTATDWRARSSADMDDTPPPRRDDAFGERSRGGGGFGES
DRFRDGPRRDDAFGGGRDRDRFRDRYDDRGPRDFDRGGFDSRSGGGGGGARDGRRAFGTG
FRRDYDDNEGGGRSGGGGAFGDRFGGDRGGDRGGDREDRFERRAESGGGGGGASTQRPKL
VLKPRSTPTAEGEAGKTTPPAPSSGGGGGGGGRASIFGNAKPVDTAAREREVEERLKKEQ
EKLQRQLEDDRGGRDLRDRPRDKEPTWRSEKEPKERSQTGSDSAQPGRGEPVATIQSPGS
RRRESERSVENEVFSGQEDQQTSPAPAPAPRPRPPTSPTSQDGLPLKVMPAPPPKENAWA
KRSTGGGTSDGDSGTPVSPPKSSSSSADERGSGKDENKADGSGAGSGAGRGKVEAKTEIR
KEPRPESEPKKFEETPAPKFSSASKYAALQIDGEQADDDEDGE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcagctaagaagaagaataagaaggggaagacccttactctcaccgacttc
ttggcagacgacaaggggaatgccatgccggcccctagtttctcgtcggccaaagcaacc
agttgggccgacgagaccgatgatctggatggagatgtctccacctcctggcacactgca
gaggacgtgttccgggggcctccaattgaccgctccattctgcccacggccccacgggca
gctcgtgagcccaacgtggaccgctcccgcctgcccaagagccccccctacaccgccttc
ctgggtaatctgccctacgatgtctcggaggaatctatcaaggacttcttcagaggtctt
gcgatcagcgctgtgcgtctgccaagggagcccagtaacccagagaggttgaagggcttt
ggctatgcagagtttgacgacgtggaatcgctcctgaatgcactcacttttaatgaggag
aaccttgggaaccggcgggttcgtgtggacattgcagaccaatccaatgacaaagagagg
gacaacggctctatgatgggccgtgaccgtgaccgaggtcatggactggaagatggaccc
gccaatacggccacggactggagagctcggtccagcgcagacatggatgataccccacca
cctagacgggatgatgctttcggagagagatcacggggcggcggcggctttggggagtca
gatcgtttcagagatggaccacggcgggatgatgcctttggtggcggaagggatcgggat
cgcttccgtgatcgctatgatgaccggggacctcgtgacttcgacagaggaggtttcgac
tctcgtagtggtggtggcggaggaggtgctagagatggccgcagagcattcggcactgga
ttcagacgagactacgatgacaatgaaggaggaggcaggagtggcggtggtggtgccttt
ggcgaccgtttcggtggtgatcgcggtggtgatcgtggcggtgatcgtgaagatcggttt
gagaggcgagcggaaagcggcggcggtggtggtggtgcatccacacagaggcccaagctt
gtcctgaagccccgcagcacccctacagcggagggggaggcggggaagactaccccaccc
gccccctcctccggtggtggcgggggcggcggcggcagagcctccatctttggcaatgcc
aaacccgtggacacggcagccagagagcgcgaggtggaggagaggctcaagaaggagcag
gagaaactgcagagacagctggaggatgaccggggcggccgtgacctacgcgacagacca
cgagacaaggaaccaacatggcgcagtgaaaaggagccaaaggagcgctctcagacgggc
agcgactctgcacagcctggacgaggtgagccggtcgcaacaatccagagtcctggttcc
cgccgcagggagagcgagcgctcggtggagaacgaggtcttcagcggccaggaggaccag
caaacctcccccgcccccgcccctgcaccccgcccccgccccccaacctccccgaccagt
caggatggcctccccctcaaagtgatgccagccccgccccccaaggagaacgcctgggcc
aagcgcagcacagggggaggaaccagcgatggggacagcggcacccccgtctctcccccc
aagagctcttccagttcagccgatgagagaggctcaggcaaggatgagaataaggcagac
ggcagtggtgcaggatctggagcgggacgtggcaaagtggaggccaagacggagatcaga
aaagagccaagaccagaatctgagccaaagaaattcgaggagacccctgctcctaagttc
agctcggccagtaagtacgctgctctgcagatagatggagagcaggctgacgacgatgag
gatggagagtga
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