Clupea harengus (Atlantic herring): 105895984
Help
Entry
105895984 CDS
T09045
Name
(RefSeq) probable vesicular acetylcholine transporter-A
KO
K14636
MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105895984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105895984
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC18: Vesicular amine transporter
105895984
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
105895984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
BT1
LacY_symp
Motif
Other DBs
NCBI-GeneID:
105895984
NCBI-ProteinID:
XP_012678150
Ensembl:
ENSCHAG00000014922
UniProt:
A0A6P3VQ17
LinkDB
All DBs
Position
23:complement(16114268..16117569)
Genome browser
AA seq
515 aa
AA seq
DB search
MESEGSTGLAKSAAVKLSEMGERTKQLGTAMQDPNRQRRIVLVIVCMALLLDNMLYMVIV
PIIPEYLAELESEQEHAFAASHSVNASFKSNKDNLDVQIGILFASKAILQLLVNPFTGTF
IDRVGYDIPLLIGLTIMFLSTCIFAMAENYATLFAARSLQGLGSAFADTSGIAMIADKYT
EESERSRALGIALAFISFGSLVAPPFGGILYEFGGKRVPFIVLACICLVDGVLLLTVIKP
FSNRSRENMPIGTPIYRLMMDPYIVVVAGALTVCNIPLAFLEPTIANWMTTTMQASEWQV
GMAWLPAFFPHVLGVYITVKLAAKYPNLQWFYGALGMVIIGASSCIVPACKNFGQLMLPL
CGICFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYSIAYAMGPIVAGQIVHNLG
FVQLNLGMGLVNVLYAPALLMLRHVCQMKPSYSERNVLLEDGPQGLYDTIKMEERKRKKK
GLSSAGNCVPIDENGMDAFREHRSYSEESSGPEYS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaaggatctacggggctggcgaaatctgccgccgtaaaactgtctgagatg
ggagaaagaactaaacaattgggcaccgctatgcaagacccaaaccgacagagacgaatt
gttttagtgattgtgtgtatggcgcttttgttagacaatatgctctacatggttatagtg
ccaataattccagaatacctggcggaactggagagtgagcaggaacatgcttttgcagct
tctcattcagtgaatgcatcattcaaaagcaacaaagacaatttagacgtccaaattgga
attttgtttgcatcaaaggctatcttgcagctgcttgtcaacccctttaccggaactttt
atagaccgggtgggatacgacattccacttttaatcggactcacgatcatgttcctctcc
acctgcatattcgcgatggccgagaattacgcgaccctcttcgcggcacgcagtctacaa
ggactcggatcggcttttgccgacacctctggaatcgcaatgattgcggacaagtacacc
gaggaatcggagagaagtcgcgcgctgggcattgccctggcgttcatttcgttcgggagc
ctggttgcaccccccttcggcggcatcctgtacgagtttggcggtaaacgagtgccattc
atagtgctcgcttgcatctgcctggtcgacggcgtcctacttttgactgtgattaagcct
ttctcgaacaggagtcgagagaacatgcccattggcaccccgatctaccgactgatgatg
gacccatacatagtcgtggtggcgggcgccctgaccgtgtgcaacatccccctggccttt
ttggagccgaccatcgccaactggatgactaccaccatgcaagccagcgagtggcaggtg
ggaatggcttggctgccagcgttttttcctcatgtcctcggggtgtacatcactgtcaaa
ttagcagccaagtatcccaacttgcagtggttttacggcgctctcggcatggtcatcata
ggagcgagctcctgtattgtgccagcctgcaaaaactttggccagctcatgctccccttg
tgcggtatctgtttcggcatcgccctggtggacaccgcgctcctgccaacactcgccttc
ctcgtcgatgtacggcacgtctccgtgtatggcagcgtgtacgccatcgctgatatatcc
tactccatcgcgtacgcgatgggccccatagtggccggtcagattgtgcacaacttgggc
tttgtgcagctgaacttgggcatgggactggtcaacgtgctctacgcgcctgctctgctc
atgctccgccacgtgtgtcagatgaagccgtcctactccgagagaaacgtcctgctggaa
gatgggccgcagggactctatgataccataaagatggaggagagaaagagaaaaaagaag
ggacttagctccgccggtaactgcgtccctattgatgaaaacggaatggacgcctttagg
gaacacaggtcgtattccgaggaatcatcaggtccagaatatagttag
DBGET
integrated database retrieval system
