Clupea harengus (Atlantic herring): 105895994
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Entry
105895994 CDS
T09045
Symbol
cul3b
Name
(RefSeq) cullin-3b
KO
K03869
cullin 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105895994 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105895994 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105895994 (cul3b)
03400 DNA repair and recombination proteins [BR:
char03400
]
105895994 (cul3b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
105895994 (cul3b)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
105895994 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
105895994
NCBI-ProteinID:
XP_031429855
Ensembl:
ENSCHAG00000013074
UniProt:
A0A6P8G2R0
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Position
9:27283063..27304290
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AA seq
767 aa
AA seq
DB search
MSNLSKGGPKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENCASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLLESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSDAGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVSEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccttagcaaaggcggccccaagaaggacaccaagatgagaatacgagctttt
cctatgactatggatgagaagtatgtcaacaacatctgggaccttctgaagaacgccatc
caggagatccagaggaagaacaacagcggcctgagcttcgaggagctctacaggaatgca
tacaccatggtgttgcacaagcacggggagaagctgtacacaggcctgcgagaggtcgtc
acggagcacctcatcaacaaagttcgagaagatgtgctcaactccctcaacaacaacttc
ctacagaccctcaaccaagcctggaacgaccatcagacagccatggtcatgatcagagac
atcctcatgtacatggaccgggtgtacgtacagcagaacaacgtggagaacgtgtacaac
ctggggctgatcatcttcagagaccaggtggtgcgctacggctgcatacgagaccacctg
agacaaacactcctggacatgatcgcccgcgagaggaagggagaggtggtggacaggggg
gccatccgtaacgcttgccagatgctgatgatcctaggcctcgaggggaggtccgtctac
gaagaggatttcgaggccccgtttttagaaatgtcagcagaatttttccagatggagagc
cagaagttcctagcagagaactgtgccagcgtgtacatcaagaaggtggaggcacggatc
aacgaggagatcgagcgggtgatgcactgcctggacaagtccacggaggagcccatcgtg
aaggtggtggagcgggagctcatctccaaacacatgaagaccatcgtggagatggagaac
tcgggcctggtccacatgctcaagaacggcaagacagaagacctggcttgtatgtacaag
ctgttcagccgcgtgccaaacggcctgaagaccatgtgtgagtgcatgagctcgtacctg
cgggagcaaggcaaggctctggtgtctgaggagggggagggcaaaaaccctgtggactac
atccagggtcttctggacctgaagtctcgtttcgaccgcttcctcctggagtccttcaac
aacgaccgcctcttcaagcagaccattgcgggcgactttgagtacttcctcaacctgaac
tcgcgctcaccagagtacctgtccctattcattgatgacaagctcaagaagggagtcaaa
ggactgacggagcaggaggtggagtccatcctggacaaggccatggtgctgttccgcttc
atgcaggagaaggatgtgtttgagaggtactacaagcagcacctggccagaagactcctc
accaacaagagcgtctccgacgactccgagaaaaatatgatctccaaactcaagactgag
tgcggatgtcagttcacctctaaactggaaggcatgttcagggacatgagcatctcaaac
acaaccatggacgagttccgacagcatttacaatcaactggggtgtctttaggtggtgtg
gacctcacagtaagagttctcactacaggatactggcccacccagtcagccacgcccaaa
tgcaacatccccccctcacccagacacgcctttgaggtcttcagaaggttctatctggct
aagcacagcggcagacagctcaccctgcagcaccacatgggctccgcggacctcaacgcc
acgttctacggccccatcaaaaaggaggatggttcggatgcaggggtcggaggggcccag
gtgaccggctccaacaccaggaagcacatactgcaggtgtccaccttccagatgaccatc
ctcatgctcttcaacaacagggagaagtccacttttgaggagatccagcaggagacggac
atccccgagcgggagctggtgcgggcgctgcagtctctggcctgtgggaagcccacgcag
cgggtcctcaccaaggagcccaagtccaaggagatcgagaacggacacgtcttcaccgtc
aacgaccagttcacctccaaactgcacagagtaaaaatccagacagtggctgccaagcag
ggcgagtcggaccccgagcgaaaggagacgcggcagaaggtggatgatgaccggaagcac
gagattgaggcggctatcgtgcgcatcatgaagtccaggaagaagatgcagcacaacgtt
ctagtttcagaggtaacccagcaactgaaagcgcgattccttcccagtcctgtggtgatt
aagaagcgcattgaaggacttattgagagagaatacttggcaagaacacccgaggatcgc
aaagtgtacacatatgtagcataa
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